Variant report

Variant rs545802303
Chromosome Location chr7:27152619-27152620
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27145800-27162800 Strong transcription Primary hematopoietic stem cells short term culture blood
2 chr7:27146400-27169600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr7:27146800-27159000 Weak transcription Primary hematopoietic stem cells blood
4 chr7:27149000-27153200 Enhancers NHDF-Ad bronchial
5 chr7:27149800-27153000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr7:27150000-27153000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr7:27150000-27153000 Flanking Active TSS NHEK skin
8 chr7:27150000-27153400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr7:27150000-27158400 Active TSS Aorta Aorta
10 chr7:27150400-27152800 Weak transcription Pancreas Pancrea
11 chr7:27150400-27153000 Flanking Active TSS HUVEC blood vessel
12 chr7:27150400-27154600 Bivalent/Poised TSS NH-A brain
13 chr7:27151000-27152800 Weak transcription Lung lung
14 chr7:27151000-27152800 Weak transcription HSMMtube muscle
15 chr7:27151000-27158200 Active TSS Breast Myoepithelial Primary Cells Breast
16 chr7:27151200-27152800 Active TSS Fetal Intestine Large intestine
17 chr7:27151200-27152800 Bivalent/Poised TSS Fetal Intestine Small intestine
18 chr7:27151200-27153000 Bivalent/Poised TSS Fetal Brain Male brain
19 chr7:27151200-27153000 Weak transcription Spleen Spleen
20 chr7:27151400-27154000 Active TSS Fetal Stomach stomach
21 chr7:27151400-27155000 Weak transcription HepG2 liver
22 chr7:27151600-27152800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr7:27151600-27154000 Active TSS NHLF lung
24 chr7:27151600-27156000 Active TSS Fetal Kidney kidney
25 chr7:27151600-27156800 Bivalent/Poised TSS Fetal Lung lung
26 chr7:27151600-27159200 Active TSS Duodenum Smooth Muscle Duodenum
27 chr7:27151800-27152800 Active TSS Stomach Smooth Muscle stomach
28 chr7:27151800-27153800 Active TSS HMEC breast
29 chr7:27151800-27157000 Active TSS Right Atrium heart
30 chr7:27152000-27152800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr7:27152000-27154000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr7:27152000-27154000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr7:27152200-27153200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr7:27152200-27153200 Bivalent/Poised TSS Fetal Thymus thymus
35 chr7:27152200-27154000 Active TSS Placenta Amnion Placenta Amnion
36 chr7:27152200-27154000 Active TSS A549 lung
37 chr7:27152400-27152800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr7:27152400-27153000 Flanking Active TSS Colon Smooth Muscle Colon
39 chr7:27152400-27153000 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
40 chr7:27152400-27153000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
41 chr7:27152400-27153200 Flanking Active TSS Adipose Nuclei Adipose
42 chr7:27152400-27153800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr7:27152600-27152800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
44 chr7:27152600-27152800 Flanking Active TSS Duodenum Mucosa Duodenum
45 chr7:27152600-27152800 Enhancers Small Intestine intestine
46 chr7:27152600-27153000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
47 chr7:27152600-27153000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr7:27152600-27153000 Flanking Active TSS Psoas Muscle Psoas
49 chr7:27152600-27153000 Flanking Active TSS Osteobl bone
50 chr7:27152600-27153200 Flanking Active TSS Muscle Satellite Cultured Cells --

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