Variant report

Variant	rs545802307
Chromosome Location	chr7:150779921-150779922
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CREB1	chr7:150779897-150781161	K562	blood:	n/a	n/a
2	MXI1	chr7:150779909-150781040	GM12878	blood:	n/a	chr7:150780683-150780692
3	ZBTB7A	chr7:150779855-150780973	ECC-1	luminal epithelium:	n/a	chr7:150780751-150780762
4	SIN3AK20	chr7:150779799-150780977	PANC-1	pancreas:	n/a	n/a
5	POLR2A	chr7:150771355-150780971	HepG2	liver:	n/a	n/a
6	PML	chr7:150779893-150780758	K562	blood:	n/a	n/a
7	E2F6	chr7:150777236-150780026	K562	blood:	n/a	chr7:150777982-150777991 chr7:150778035-150778042 chr7:150778130-150778139
8	HDAC2	chr7:150779874-150780378	K562	blood:	n/a	n/a
9	POLR2A	chr7:150779750-150781082	SK-N-MC	brain:	n/a	n/a
10	POLR2A	chr7:150779794-150781006	PANC-1	pancreas:	n/a	n/a
11	TAF1	chr7:150779758-150780832	K562	blood:	n/a	n/a
12	POLR2A	chr7:150779892-150781497	IMR90	lung:	n/a	n/a
13	POLR2A	chr7:150777099-150780798	K562	blood:	n/a	n/a
14	YY1	chr7:150779166-150779969	K562	blood:	n/a	chr7:150779707-150779721
15	CCNT2	chr7:150779406-150780927	K562	blood:	n/a	chr7:150780134-150780143 chr7:150780800-150780809 chr7:150780128-150780137 chr7:150780394-150780403
16	POLR2A	chr7:150779759-150780292	K562	blood:	n/a	n/a
17	HEY1	chr7:150777076-150780386	K562	blood:	n/a	chr7:150778008-150778023
18	MAZ	chr7:150777093-150781017	K562	blood:	n/a	chr7:150778013-150778023
19	SIN3AK20	chr7:150779866-150781098	MCF-7	breast:	n/a	n/a
20	HEY1	chr7:150779127-150780403	K562	blood:	n/a	n/a
21	MAZ	chr7:150779881-150780995	GM12878	blood:	n/a	n/a
22	ARID3A	chr7:150779712-150779985	K562	blood:	n/a	n/a
23	ETS1	chr7:150779586-150781050	K562	blood:	n/a	chr7:150780134-150780145 chr7:150780555-150780565 chr7:150780556-150780569 chr7:150780266-150780277 chr7:150780135-150780146 chr7:150780555-150780566 chr7:150780635-150780648 chr7:150780557-150780566 chr7:150780737-150780748 chr7:150780557-150780566
24	HMGN3	chr7:150779306-150780862	K562	blood:	n/a	n/a
25	TBP	chr7:150777177-150780981	K562	blood:	n/a	n/a
26	SIN3AK20	chr7:150779791-150780937	K562	blood:	n/a	n/a
27	ZBTB7A	chr7:150779747-150780892	K562	blood:	n/a	chr7:150780751-150780762
28	IRF1	chr7:150779820-150780863	K562	blood:	n/a	chr7:150780659-150780673 chr7:150780130-150780144
29	MXI1	chr7:150779918-150780923	HepG2	liver:	n/a	chr7:150780683-150780692
30	POLR2A	chr7:150771379-150780837	K562	blood:	n/a	n/a
31	GTF2F1	chr7:150779503-150780104	K562	blood:	n/a	n/a
32	RCOR1	chr7:150779422-150780627	K562	blood:	n/a	n/a
33	POLR2A	chr7:150779754-150780743	K562	blood:	n/a	n/a
34	WRNIP1	chr7:150779908-150780082	GM12878	blood:	n/a	n/a
35	EGR1	chr7:150779899-150780965	K562	blood:	n/a	chr7:150780105-150780119 chr7:150780794-150780809 chr7:150780491-150780501 chr7:150780133-150780143 chr7:150780557-150780566 chr7:150780487-150780500 chr7:150780737-150780751 chr7:150780123-150780136 chr7:150780795-150780808 chr7:150780607-150780621 chr7:150780737-150780750 chr7:150780736-150780751 chr7:150780126-150780140 chr7:150780796-150780806 chr7:150780738-150780749 chr7:150780740-150780749 chr7:150780795-150780808 chr7:150780663-150780673 chr7:150780737-150780750 chr7:150780252-150780267 chr7:150780134-150780144 chr7:150780130-150780139 chr7:150780395-150780408 chr7:150780737-150780750 chr7:150780129-150780142
36	MAX	chr7:150776885-150781120	K562	blood:	n/a	chr7:150778013-150778023
37	POLR2A	chr7:150779779-150780742	PANC-1	pancreas:	n/a	n/a
38	MYC	chr7:150776983-150781134	K562	blood:	n/a	chr7:150778013-150778023
39	MXI1	chr7:150779473-150781629	SK-N-SH	brain:	n/a	chr7:150780683-150780692
40	POLR2A	chr7:150770710-150780869	K562	blood:	n/a	n/a
41	MAX	chr7:150779879-150780899	K562	blood:	n/a	n/a
42	MYC	chr7:150779838-150781061	K562	blood:	n/a	n/a
43	MAX	chr7:150776903-150781102	HepG2	liver:	n/a	chr7:150778013-150778023
44	NR2F2	chr7:150775943-150781692	K562	blood:	n/a	n/a
45	POLR2A	chr7:150776958-150780877	K562	blood:	n/a	n/a
46	HCFC1	chr7:150779699-150781158	Hela-S3	cervix:	n/a	n/a
47	TBL1XR1	chr7:150779140-150780931	K562	blood:	n/a	n/a
48	NR2F2	chr7:150779768-150780423	K562	blood:	n/a	n/a
49	POLR2A	chr7:150778557-150780366	K562	blood:	n/a	n/a
50	ETS1	chr7:150779765-150780379	K562	blood:	n/a	chr7:150780134-150780145 chr7:150780266-150780277 chr7:150780135-150780146

Variant related genes	Relation type
FASTK	TF binding region
AGAP3	TF binding region

Extended variants
information (count: 27 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1821419	chr7:150593315-150974269	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	128 gene(s)	inside rSNPs	diseases
2	nsv1022246	chr7:150619660-150779924	Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Enhancers Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
3	nsv889465	chr7:150640285-150800823	Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
4	nsv1017863	chr7:150643928-150779924	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
5	nsv539197	chr7:150643928-150779924	Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
6	nsv1028645	chr7:150643928-150806534	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
7	nsv539198	chr7:150643928-150879259	Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	72 gene(s)	inside rSNPs	diseases
8	nsv889476	chr7:150729212-150951819	Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	120 gene(s)	inside rSNPs	diseases
9	nsv1031733	chr7:150730999-150790517	Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
10	nsv889477	chr7:150731698-150837529	Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Active TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	57 gene(s)	inside rSNPs	diseases
11	nsv889478	chr7:150732812-150889527	Strong transcription Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	61 gene(s)	inside rSNPs	diseases
12	nsv831188	chr7:150735204-150912875	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
13	nsv889479	chr7:150736382-150785321	Flanking Active TSS Active TSS Enhancers Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
14	nsv889480	chr7:150736382-150797581	Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	46 gene(s)	inside rSNPs	diseases
15	nsv1028023	chr7:150738624-150790517	Strong transcription Genic enhancers Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
16	nsv465214	chr7:150751590-150822192	Flanking Active TSS Enhancers Bivalent/Poised TSS Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
17	nsv609012	chr7:150751590-150822192	Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
18	nsv609013	chr7:150751590-150832913	Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
19	nsv465215	chr7:150762871-150825087	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
20	nsv609014	chr7:150762871-150825087	Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
21	nsv889481	chr7:150766799-150837529	Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
22	nsv889482	chr7:150766799-150851566	Genic enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	45 gene(s)	inside rSNPs	diseases
23	nsv889483	chr7:150773165-150787046	Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	26 gene(s)	inside rSNPs	diseases
24	nsv889484	chr7:150774308-150787046	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Weak transcription Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	26 gene(s)	inside rSNPs	diseases
25	nsv889485	chr7:150774308-150788304	Strong transcription Active TSS Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	27 gene(s)	inside rSNPs	diseases
26	nsv889486	chr7:150775306-150891641	Enhancers Active TSS Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	48 gene(s)	inside rSNPs	diseases
27	esv3406348	chr7:150779369-150781767	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150776400-150780000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
2	chr7:150776800-150781000	Active TSS	H9 Cell Line	embryonic stem cell
3	chr7:150776800-150781200	Active TSS	Pancreatic Islets	Pancreatic Islet
4	chr7:150777000-150781000	Active TSS	iPS-20b Cell Line	embryonic stem cell
5	chr7:150777200-150780600	Active TSS	Small Intestine	intestine
6	chr7:150777200-150780800	Active TSS	iPS-18 Cell Line	embryonic stem cell
7	chr7:150777600-150780600	Enhancers	Fetal Brain Male	brain
8	chr7:150778000-150780000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr7:150778000-150780000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr7:150778000-150780000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
11	chr7:150778000-150780000	Flanking Active TSS	Liver	Liver
12	chr7:150778000-150780000	Flanking Active TSS	Colonic Mucosa	Colon
13	chr7:150778000-150780000	Flanking Active TSS	Pancreas	Pancrea
14	chr7:150778000-150780000	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
15	chr7:150778000-150780000	Flanking Active TSS	Stomach Smooth Muscle	stomach
16	chr7:150778000-150780000	Flanking Active TSS	HUVEC	blood vessel
17	chr7:150778000-150780000	Flanking Active TSS	Osteobl	bone
18	chr7:150778000-150780200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr7:150778000-150780200	Flanking Active TSS	Adipose Nuclei	Adipose
20	chr7:150778000-150780200	Flanking Active TSS	Fetal Muscle Leg	muscle
21	chr7:150778200-150780000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
22	chr7:150778200-150780000	Flanking Active TSS	Hela-S3	cervix
23	chr7:150778200-150780200	Flanking Active TSS	Brain Germinal Matrix	brain
24	chr7:150778400-150780000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr7:150778400-150780000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
26	chr7:150778600-150780000	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr7:150778600-150780000	Flanking Active TSS	Colon Smooth Muscle	Colon
28	chr7:150778600-150780000	Flanking Active TSS	Duodenum Mucosa	Duodenum
29	chr7:150778600-150780000	Flanking Active TSS	Fetal Intestine Large	intestine
30	chr7:150778600-150780000	Flanking Active TSS	Placenta	Placenta
31	chr7:150778600-150780000	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
32	chr7:150778600-150780000	Flanking Active TSS	Rectal Smooth Muscle	rectum
33	chr7:150778600-150780000	Flanking Active TSS	NHDF-Ad	bronchial
34	chr7:150778600-150780200	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
35	chr7:150778800-150780000	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr7:150778800-150780000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr7:150778800-150780000	Flanking Active TSS	HSMM	muscle
38	chr7:150778800-150780200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
39	chr7:150779000-150780000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
40	chr7:150779000-150780000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr7:150779000-150780000	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
42	chr7:150779000-150780000	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
43	chr7:150779000-150780000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr7:150779000-150780000	Flanking Active TSS	Esophagus	oesophagus
45	chr7:150779000-150780000	Flanking Active TSS	HSMMtube	muscle
46	chr7:150779000-150780200	Flanking Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr7:150779200-150780000	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr7:150779200-150780000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
49	chr7:150779200-150780000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr7:150779200-150780000	Flanking Active TSS	Placenta Amnion	Placenta Amnion

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