Variant report

Variant	rs545983925
Chromosome Location	chr1:59194693-59194694
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2572403	chr1:59193389-59196585	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3438149	chr1:59194264-59197912	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3341436	chr1:59194539-59197362	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59183400-59197600	Weak transcription	Aorta	Aorta
2	chr1:59192600-59204200	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr1:59193600-59197800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr1:59193600-59200200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr1:59193800-59197400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr1:59193800-59197400	Weak transcription	Osteobl	bone
7	chr1:59193800-59197600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr1:59193800-59197600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr1:59194400-59197200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr1:59194400-59197400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr1:59194400-59197400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr1:59194400-59197400	Weak transcription	NHEK	skin
13	chr1:59194400-59197600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:59194400-59197600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr1:59194400-59197600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr1:59194400-59197600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr1:59194400-59197600	Weak transcription	HMEC	breast
18	chr1:59194400-59197600	Weak transcription	NHDF-Ad	bronchial
19	chr1:59194400-59197800	Weak transcription	Placenta Amnion	Placenta Amnion

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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