Variant report

Variant	rs546094634
Chromosome Location	chr6:44693000-44693001
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:44681103..44683539-chr6:44690355..44693257,2	MCF-7	breast:
2	chr6:44691206..44694141-chr6:44700242..44701897,2	K562	blood:
3	chr6:44689048..44691057-chr6:44692062..44695050,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817071	chr6:44670110-44698829	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv17149	chr6:44692192-44693108	Weak transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44689600-44693200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr6:44690200-44693200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr6:44690400-44698000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr6:44691400-44695400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:44691600-44693000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:44691600-44695400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:44692400-44693000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
8	chr6:44692600-44693000	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr6:44692600-44693000	Enhancers	Adipose Nuclei	Adipose
10	chr6:44692600-44693400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr6:44692600-44693600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr6:44692800-44693000	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr6:44692800-44693000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr6:44692800-44693000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:44692800-44693000	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
16	chr6:44692800-44693000	Flanking Bivalent TSS/Enh	Left Ventricle	heart
17	chr6:44692800-44693000	Enhancers	Lung	lung
18	chr6:44692800-44693000	Enhancers	Right Atrium	heart
19	chr6:44692800-44693000	Enhancers	Spleen	Spleen
20	chr6:44693000-44693200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr6:44693000-44695400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr6:44693000-44698200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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