Variant report

Variant	rs546105186
Chromosome Location	chr4:166333536-166333537
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv822819	chr4:166333413-166333962	Weak transcription Enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:166319600-166361800	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr4:166320000-166339000	Weak transcription	Brain Hippocampus Middle	brain
3	chr4:166320000-166339200	Weak transcription	Brain Substantia Nigra	brain
4	chr4:166325800-166334600	Weak transcription	Fetal Brain Male	brain
5	chr4:166326000-166339000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr4:166326400-166338800	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr4:166326600-166337200	Weak transcription	Aorta	Aorta
8	chr4:166326800-166364400	Weak transcription	Brain Germinal Matrix	brain
9	chr4:166327200-166334800	Weak transcription	Fetal Brain Female	brain
10	chr4:166327400-166339200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr4:166330600-166333800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr4:166330800-166337200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr4:166332000-166335000	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr4:166332200-166335800	Weak transcription	Brain Anterior Caudate	brain
15	chr4:166332800-166334000	Weak transcription	HepG2	liver
16	chr4:166332800-166339200	Weak transcription	Brain Angular Gyrus	brain
17	chr4:166333000-166334400	Weak transcription	Brain Cingulate Gyrus	brain
18	chr4:166333200-166335200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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