Variant report

Variant	rs546146268
Chromosome Location	chr8:85199555-85199556
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:10 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753846	chr8:84637092-85239703	Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv1842719	chr8:85198548-85268951	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	esv2414076	chr8:85199402-85199833	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
5	esv3519248	chr8:85199487-85199690	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
6	esv3519247	chr8:85199495-85199659	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
7	esv3519249	chr8:85199514-85199699	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv3369870	chr8:85199515-85199629	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv3519250	chr8:85199535-85199699	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3519251	chr8:85199546-85199659	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85198000-85200600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:85198200-85200400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:85198600-85200400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr8:85199000-85201000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:85199400-85201000	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr8:85199400-85201600	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr8:85199400-85205800	Enhancers	HUES64 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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