Variant report

Variant	rs546511978
Chromosome Location	chr12:118229757-118229758
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv560387	chr12:118219415-118239673	Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
2	esv3335627	chr12:118229369-118234167	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Genic enhancers	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
3	esv3333731	chr12:118229469-118233667	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a
4	esv3329687	chr12:118229569-118233767	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:118210000-118230800	Weak transcription	Pancreas	Pancrea
2	chr12:118226000-118229800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr12:118227600-118230800	Weak transcription	Spleen	Spleen
4	chr12:118228600-118230600	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr12:118228800-118230800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr12:118229400-118230600	Enhancers	Skeletal Muscle Male	skeletal muscle
7	chr12:118229600-118230800	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr12:118229600-118231200	Enhancers	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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