Variant report

Variant	rs546514625
Chromosome Location	chr3:159256475-159256476
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998949	chr3:158774806-159394550	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	4 gene(s)	inside rSNPs	diseases
2	nsv877696	chr3:159184569-159257961	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv877697	chr3:159198139-159259124	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv519199	chr3:159248823-159259124	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
5	nsv511197	chr3:159252752-159257961	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases
6	nsv513091	chr3:159254887-159257753	Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3462777	chr3:159255058-159259656	Enhancers	lncRNA	n/a	inside rSNPs	diseases
8	esv3489704	chr3:159256308-159258706	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159253600-159257000	Enhancers	Liver	Liver
2	chr3:159255800-159256600	Enhancers	Rectal Smooth Muscle	rectum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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