Variant report

Variant rs546553977
Chromosome Location chr17:43706722-43706723
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43697800-43706800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr17:43697800-43707400 Weak transcription Brain Substantia Nigra brain
3 chr17:43698200-43706800 Weak transcription Liver Liver
4 chr17:43698200-43706800 Weak transcription Colonic Mucosa Colon
5 chr17:43698200-43706800 Weak transcription Duodenum Mucosa Duodenum
6 chr17:43698200-43706800 Weak transcription Lung lung
7 chr17:43698200-43706800 Weak transcription A549 lung
8 chr17:43698200-43707000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr17:43698200-43707000 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr17:43698200-43707000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr17:43698200-43707000 Weak transcription Brain Cingulate Gyrus brain
12 chr17:43698200-43707000 Weak transcription Rectal Mucosa Donor 29 rectum
13 chr17:43698200-43707000 Weak transcription Small Intestine intestine
14 chr17:43698200-43707000 Weak transcription Spleen Spleen
15 chr17:43698200-43707200 Weak transcription Primary B cells from cord blood blood
16 chr17:43698200-43707200 Weak transcription Rectal Smooth Muscle rectum
17 chr17:43698200-43707200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr17:43698200-43707200 Weak transcription Hela-S3 cervix
19 chr17:43698200-43707200 Weak transcription HUVEC blood vessel
20 chr17:43698200-43707400 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr17:43698200-43712600 Weak transcription NH-A brain
22 chr17:43698200-43719000 Weak transcription K562 blood
23 chr17:43698400-43706800 Weak transcription HepG2 liver
24 chr17:43698400-43707000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr17:43698400-43707000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr17:43698400-43707000 Weak transcription Gastric stomach
27 chr17:43698400-43707000 Weak transcription Ovary ovary
28 chr17:43698400-43707000 Weak transcription Thymus Thymus
29 chr17:43698400-43707200 Weak transcription Esophagus oesophagus
30 chr17:43698400-43707200 Weak transcription Left Ventricle heart
31 chr17:43698400-43707200 Weak transcription Right Ventricle heart
32 chr17:43698400-43707400 Weak transcription Primary hematopoietic stem cells blood
33 chr17:43698400-43707400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr17:43698800-43706800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr17:43698800-43706800 Weak transcription Brain Inferior Temporal Lobe brain
36 chr17:43698800-43706800 Weak transcription GM12878-XiMat blood
37 chr17:43698800-43707000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr17:43698800-43707000 Weak transcription H9 Cell Line embryonic stem cell
39 chr17:43698800-43707000 Weak transcription iPS-15b Cell Line embryonic stem cell
40 chr17:43698800-43707000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr17:43698800-43707000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr17:43698800-43707000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr17:43698800-43707000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr17:43698800-43707000 Weak transcription Colon Smooth Muscle Colon
45 chr17:43698800-43707000 Weak transcription HSMMtube muscle
46 chr17:43698800-43707200 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr17:43698800-43707200 Weak transcription HMEC breast
48 chr17:43698800-43707200 Weak transcription HSMM muscle
49 chr17:43698800-43707200 Weak transcription Osteobl bone
50 chr17:43698800-43707400 Weak transcription Brain Hippocampus Middle brain

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