Variant report

Variant	rs546688929
Chromosome Location	chr7:18601826-18601827
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755157	chr7:18337660-18805860	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv887812	chr7:18548719-18622368	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv516893	chr7:18601365-18614519	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18581600-18620200	Weak transcription	HSMMtube	muscle
2	chr7:18593000-18606400	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr7:18593600-18605000	Weak transcription	Brain Hippocampus Middle	brain
4	chr7:18593600-18605800	Weak transcription	Primary B cells from peripheral blood	blood
5	chr7:18596800-18612600	Weak transcription	Pancreatic Islets	Pancreatic Islet
6	chr7:18598200-18610200	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr7:18598600-18613000	Weak transcription	Spleen	Spleen
8	chr7:18599000-18606200	Weak transcription	NHEK	skin
9	chr7:18599000-18606400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr7:18599000-18613200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr7:18599000-18613200	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr7:18599400-18606400	Weak transcription	Aorta	Aorta
13	chr7:18600400-18613200	Weak transcription	Right Ventricle	heart
14	chr7:18600600-18602000	Weak transcription	Skeletal Muscle Female	skeletal muscle
15	chr7:18600600-18604400	Weak transcription	Primary B cells from cord blood	blood
16	chr7:18600600-18613200	Weak transcription	Left Ventricle	heart
17	chr7:18600600-18617600	Weak transcription	Psoas Muscle	Psoas
18	chr7:18600800-18602000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr7:18601000-18610200	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr7:18601600-18609600	Weak transcription	Fetal Heart	heart
21	chr7:18601600-18613800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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