Variant report

Variant	rs547074042
Chromosome Location	chr11:76074775-76074776
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr11:76074674-76074789	GM10248	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:76072573..76074969-chr11:76078510..76081231,2	K562	blood:
2	chr11:76073015..76075782-chr11:76080642..76082701,2	MCF-7	breast:
3	chr11:76074770..76077133-chr11:76087640..76089591,2	K562	blood:

Variant related genes	Relation type
PRKRIR	TF binding region
ENSG00000137492	Chromatin interaction

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521451	chr11:76053527-76087844	Strong transcription Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases
2	esv3439808	chr11:76074633-76079115	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:108 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76054600-76080600	Weak transcription	Psoas Muscle	Psoas
2	chr11:76056800-76080600	Weak transcription	Small Intestine	intestine
3	chr11:76059000-76082000	Weak transcription	HMEC	breast
4	chr11:76062600-76079200	Weak transcription	Stomach Mucosa	stomach
5	chr11:76063000-76077000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr11:76066000-76077600	Strong transcription	Primary T helper cells fromperipheralblood	blood
7	chr11:76066200-76079400	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr11:76066200-76085800	Weak transcription	Esophagus	oesophagus
9	chr11:76066400-76077000	Weak transcription	Fetal Heart	heart
10	chr11:76066400-76079600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr11:76066400-76089200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr11:76066400-76090000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr11:76066600-76074800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
14	chr11:76066600-76076000	Weak transcription	Thymus	Thymus
15	chr11:76066600-76076800	Strong transcription	Primary monocytes fromperipheralblood	blood
16	chr11:76066600-76080600	Weak transcription	Spleen	Spleen
17	chr11:76066600-76082000	Weak transcription	Right Ventricle	heart
18	chr11:76066600-76082000	Weak transcription	NH-A	brain
19	chr11:76066600-76090000	Weak transcription	Fetal Brain Female	brain
20	chr11:76066800-76082000	Weak transcription	Stomach Smooth Muscle	stomach
21	chr11:76067200-76077200	Weak transcription	HepG2	liver
22	chr11:76067400-76074800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
23	chr11:76067400-76076000	Weak transcription	Primary neutrophils fromperipheralblood	blood
24	chr11:76067400-76076800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr11:76067400-76077800	Weak transcription	Placenta Amnion	Placenta Amnion
26	chr11:76067400-76080600	Weak transcription	Right Atrium	heart
27	chr11:76067400-76082000	Weak transcription	NHLF	lung
28	chr11:76067600-76074800	Strong transcription	Primary hematopoietic stem cells	blood
29	chr11:76067600-76075400	Weak transcription	Fetal Muscle Trunk	muscle
30	chr11:76067600-76075600	Weak transcription	Fetal Muscle Leg	muscle
31	chr11:76067600-76076000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr11:76067600-76076000	Weak transcription	Ovary	ovary
33	chr11:76067600-76076000	Strong transcription	Dnd41	blood
34	chr11:76067600-76076400	Weak transcription	Gastric	stomach
35	chr11:76067600-76076600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
36	chr11:76067600-76079000	Weak transcription	Fetal Lung	lung
37	chr11:76067600-76079400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
38	chr11:76067600-76082000	Weak transcription	Aorta	Aorta
39	chr11:76067600-76082000	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr11:76067600-76082000	Weak transcription	GM12878-XiMat	blood
41	chr11:76067600-76082000	Weak transcription	NHEK	skin
42	chr11:76067600-76082200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr11:76067600-76082400	Weak transcription	Cortex derived primary cultured neurospheres	brain
44	chr11:76067600-76085800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr11:76067600-76090400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr11:76067600-76091000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr11:76067800-76076000	Weak transcription	Sigmoid Colon	Sigmoid Colon
48	chr11:76067800-76079200	Weak transcription	Fetal Kidney	kidney
49	chr11:76067800-76079400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
50	chr11:76067800-76080400	Weak transcription	Liver	Liver

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