Variant report

Variant	rs547197187
Chromosome Location	chr7:18549143-18549144
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2755157	chr7:18337660-18805860	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv887812	chr7:18548719-18622368	Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:68 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18541800-18551600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr7:18542000-18553200	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr7:18543000-18549600	Enhancers	Primary B cells from peripheral blood	blood
4	chr7:18543000-18554400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr7:18545600-18554200	Weak transcription	Fetal Brain Female	brain
6	chr7:18546000-18551000	Weak transcription	Brain Hippocampus Middle	brain
7	chr7:18546200-18551800	Enhancers	Primary B cells from cord blood	blood
8	chr7:18547800-18549400	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr7:18547800-18549400	Enhancers	Hela-S3	cervix
10	chr7:18547800-18549600	Enhancers	iPS-18 Cell Line	embryonic stem cell
11	chr7:18548000-18549400	Enhancers	iPS-20b Cell Line	embryonic stem cell
12	chr7:18548000-18549600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr7:18548000-18550200	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr7:18548000-18551000	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr7:18548200-18549200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr7:18548200-18549400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr7:18548200-18549400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr7:18548200-18549400	Enhancers	Fetal Muscle Leg	muscle
19	chr7:18548200-18549600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr7:18548200-18549800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr7:18548200-18549800	Flanking Active TSS	Osteobl	bone
22	chr7:18548200-18550800	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr7:18548400-18549200	Enhancers	H1 Cell Line	embryonic stem cell
24	chr7:18548400-18549200	Flanking Active TSS	Fetal Heart	heart
25	chr7:18548400-18549400	Flanking Active TSS	HUVEC	blood vessel
26	chr7:18548400-18549600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
27	chr7:18548400-18549600	Active TSS	Stomach Mucosa	stomach
28	chr7:18548400-18549600	Flanking Active TSS	HSMM	muscle
29	chr7:18548400-18551000	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
30	chr7:18548600-18549200	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr7:18548600-18549200	Enhancers	Primary hematopoietic stem cells	blood
32	chr7:18548600-18549400	Enhancers	Brain Inferior Temporal Lobe	brain
33	chr7:18548600-18549400	Enhancers	Duodenum Smooth Muscle	Duodenum
34	chr7:18548600-18549400	Active TSS	Psoas Muscle	Psoas
35	chr7:18548600-18549400	Active TSS	Right Ventricle	heart
36	chr7:18548600-18549600	Flanking Active TSS	GM12878-XiMat	blood
37	chr7:18548600-18550400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr7:18548600-18551200	Active TSS	NHEK	skin
39	chr7:18548600-18551400	Active TSS	Aorta	Aorta
40	chr7:18548600-18551400	Active TSS	HMEC	breast
41	chr7:18548600-18551400	Active TSS	NH-A	brain
42	chr7:18548800-18549200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
43	chr7:18548800-18549200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr7:18548800-18549200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr7:18548800-18549200	Active TSS	Adipose Nuclei	Adipose
46	chr7:18548800-18549400	Enhancers	Brain Anterior Caudate	brain
47	chr7:18548800-18549400	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
48	chr7:18548800-18549600	Enhancers	Rectal Mucosa Donor 31	rectum
49	chr7:18548800-18549800	Flanking Active TSS	NHLF	lung
50	chr7:18548800-18550000	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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