No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
nsv529398 |
chr12:941915-1741311 |
Weak transcription Strong transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
50 gene(s)
|
inside rSNPs
|
diseases
|
2 |
nsv1042863 |
chr12:1163817-1902302 |
Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
46 gene(s)
|
inside rSNPs
|
diseases
|
3 |
nsv541345 |
chr12:1163817-1902302 |
Strong transcription Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
46 gene(s)
|
inside rSNPs
|
diseases
|
4 |
esv3397478 |
chr12:1535455-1730159 |
Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
5 |
nsv898584 |
chr12:1607390-1783251 |
Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
25 gene(s)
|
inside rSNPs
|
diseases
|
6 |
nsv826180 |
chr12:1614395-1759431 |
Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
diseases
|
7 |
nsv826181 |
chr12:1619798-1754941 |
Active TSS Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
11 gene(s)
|
inside rSNPs
|
diseases
|
8 |
nsv898586 |
chr12:1690140-1734365 |
Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|
9 |
nsv556979 |
chr12:1700134-1704325 |
Active TSS Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
10 |
esv3438770 |
chr12:1701716-1704664 |
Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
11 |
nsv556984 |
chr12:1702470-1704205 |
Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
12 |
esv1793457 |
chr12:1702470-1704325 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
13 |
esv1793746 |
chr12:1702470-1704325 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
14 |
esv1799354 |
chr12:1702470-1704325 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
15 |
esv1820484 |
chr12:1702470-1704325 |
Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
16 |
esv1834585 |
chr12:1702470-1704325 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
17 |
esv1836763 |
chr12:1702470-1704325 |
Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
18 |
esv1837561 |
chr12:1702470-1704325 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
19 |
esv1839669 |
chr12:1702470-1704325 |
Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
20 |
esv1844404 |
chr12:1702470-1704325 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
21 |
nsv556985 |
chr12:1702470-1704325 |
Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
22 |
nsv556986 |
chr12:1702470-1705852 |
Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
23 |
esv18273 |
chr12:1702491-1704405 |
Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Enhancers
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
24 |
esv3403028 |
chr12:1702616-1704989 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
25 |
nsv556990 |
chr12:1702707-1704205 |
Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
26 |
nsv556992 |
chr12:1702913-1704205 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
27 |
nsv556993 |
chr12:1703070-1704325 |
Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive region
|
9 gene(s)
|
inside rSNPs
|
diseases
|
28 |
esv1834423 |
chr12:1703324-1727170 |
Active TSS Weak transcription Genic enhancers Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
9 gene(s)
|
inside rSNPs
|
diseases
|