The 2.0 version of rSNPBase

Variant report

Variant rs547460647
Chromosome Location chr6:34317630-34317631
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:34261800-34330800 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr6:34285200-34330600 Weak transcription Thymus Thymus
3 chr6:34285800-34326600 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr6:34289000-34325200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:34298600-34326400 Weak transcription A549 lung
6 chr6:34301600-34318000 Weak transcription Fetal Brain Female brain
7 chr6:34306000-34327800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:34306000-34328800 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr6:34307000-34320000 Weak transcription Ovary ovary
10 chr6:34308800-34330800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr6:34309200-34318200 Weak transcription Fetal Lung lung
12 chr6:34309400-34317800 Weak transcription Brain Germinal Matrix brain
13 chr6:34309600-34319800 Weak transcription Small Intestine intestine
14 chr6:34309600-34329200 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr6:34309800-34318000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr6:34309800-34318000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr6:34309800-34318000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr6:34309800-34318000 Weak transcription Fetal Intestine Small intestine
19 chr6:34309800-34318600 Weak transcription HMEC breast
20 chr6:34309800-34320000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr6:34309800-34320000 Weak transcription Pancreas Pancrea
22 chr6:34309800-34320200 Weak transcription HepG2 liver
23 chr6:34309800-34321400 Weak transcription Lung lung
24 chr6:34309800-34327000 Weak transcription Fetal Muscle Trunk muscle
25 chr6:34309800-34329800 Weak transcription Fetal Thymus thymus
26 chr6:34309800-34330800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr6:34309800-34337600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:34309800-34347200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr6:34310000-34318000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr6:34310000-34320200 Weak transcription Fetal Stomach stomach
31 chr6:34310000-34330600 Weak transcription Dnd41 blood
32 chr6:34310200-34318000 Weak transcription Liver Liver
33 chr6:34310200-34318000 Weak transcription Fetal Muscle Leg muscle
34 chr6:34310200-34318000 Weak transcription NHLF lung
35 chr6:34310200-34318200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr6:34310400-34318000 Weak transcription Colon Smooth Muscle Colon
37 chr6:34310400-34320000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr6:34310400-34321600 Weak transcription Right Ventricle heart
39 chr6:34310400-34329200 Weak transcription Brain Angular Gyrus brain
40 chr6:34310600-34320000 Weak transcription Brain Cingulate Gyrus brain
41 chr6:34310600-34326400 Weak transcription Rectal Smooth Muscle rectum
42 chr6:34310800-34318000 Weak transcription Brain Substantia Nigra brain
43 chr6:34310800-34318800 Weak transcription Right Atrium heart
44 chr6:34310800-34320000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr6:34310800-34330800 Weak transcription Primary T cells from cord blood blood
46 chr6:34311200-34321800 Weak transcription Psoas Muscle Psoas
47 chr6:34312200-34318000 Weak transcription Adipose Nuclei Adipose
48 chr6:34312400-34318000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr6:34312400-34318600 Weak transcription Brain Anterior Caudate brain
50 chr6:34313400-34319000 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015