Variant report

Variant	rs547475829
Chromosome Location	chr9:94298956-94298957
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:94291588..94293189-chr9:94297156..94299545,2	MCF-7	breast:

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3332537	chr9:94298446-94327291	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:38 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94292800-94299800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr9:94293200-94300200	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr9:94293200-94302000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr9:94295000-94299600	Enhancers	NH-A	brain
5	chr9:94296400-94299400	Enhancers	HMEC	breast
6	chr9:94297400-94300800	Enhancers	Fetal Intestine Large	intestine
7	chr9:94297600-94299000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr9:94297600-94299800	Enhancers	Fetal Intestine Small	intestine
9	chr9:94297800-94299000	Enhancers	NHEK	skin
10	chr9:94297800-94299200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr9:94297800-94299800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr9:94298000-94299000	Enhancers	Muscle Satellite Cultured Cells	--
13	chr9:94298000-94299000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
14	chr9:94298000-94299000	Enhancers	Hela-S3	cervix
15	chr9:94298000-94299200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr9:94298000-94299600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr9:94298000-94299600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr9:94298000-94299800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr9:94298000-94299800	Enhancers	NHDF-Ad	bronchial
20	chr9:94298000-94300600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr9:94298200-94299000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr9:94298200-94299000	Enhancers	Placenta Amnion	Placenta Amnion
23	chr9:94298200-94299000	Enhancers	HSMM	muscle
24	chr9:94298200-94299200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
25	chr9:94298200-94299200	Enhancers	HepG2	liver
26	chr9:94298400-94299000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr9:94298400-94299000	Flanking Active TSS	A549	lung
28	chr9:94298400-94299800	Enhancers	Rectal Mucosa Donor 29	rectum
29	chr9:94298400-94299800	Enhancers	Rectal Mucosa Donor 31	rectum
30	chr9:94298600-94299000	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr9:94298600-94299000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr9:94298600-94299000	Enhancers	Fetal Lung	lung
33	chr9:94298600-94299000	Enhancers	Lung	lung
34	chr9:94298600-94299000	Enhancers	Stomach Mucosa	stomach
35	chr9:94298600-94299000	Flanking Active TSS	Osteobl	bone
36	chr9:94298600-94299600	Enhancers	HUES6 Cell Line	embryonic stem cell
37	chr9:94298800-94299000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr9:94298800-94299200	Enhancers	Pancreatic Islets	Pancreatic Islet

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