Variant report

Variant rs547720240
Chromosome Location chr4:187125370-187125371
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187113800-187125400 Weak transcription Esophagus oesophagus
2 chr4:187113800-187126000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:187113800-187130600 Weak transcription Stomach Mucosa stomach
4 chr4:187113800-187131400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr4:187113800-187132200 Weak transcription Colonic Mucosa Colon
6 chr4:187114000-187133200 Weak transcription HSMM muscle
7 chr4:187114200-187126000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr4:187114800-187130000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr4:187115200-187125600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr4:187115200-187133600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr4:187115400-187125600 Weak transcription Brain Substantia Nigra brain
12 chr4:187115400-187130400 Weak transcription Small Intestine intestine
13 chr4:187116800-187125400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr4:187117400-187125600 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr4:187117600-187126200 Weak transcription Brain Hippocampus Middle brain
16 chr4:187117600-187140600 Weak transcription Aorta Aorta
17 chr4:187117800-187125600 Weak transcription Ovary ovary
18 chr4:187119800-187129800 Weak transcription Dnd41 blood
19 chr4:187119800-187130200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr4:187120000-187125600 Weak transcription Primary B cells from cord blood blood
21 chr4:187120000-187127000 Weak transcription Primary T cells from cord blood blood
22 chr4:187120000-187129800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr4:187120200-187125600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr4:187120200-187126000 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr4:187121800-187132800 Weak transcription Brain Cingulate Gyrus brain
26 chr4:187122000-187129200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr4:187122000-187130200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr4:187122400-187125600 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr4:187123000-187127800 Strong transcription Liver Liver
30 chr4:187123600-187125600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr4:187123600-187128800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr4:187123800-187130400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr4:187124000-187125600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr4:187124200-187125600 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr4:187124200-187125600 Enhancers Rectal Mucosa Donor 31 rectum
36 chr4:187124400-187125800 Weak transcription Fetal Brain Male brain
37 chr4:187124400-187125800 Active TSS Fetal Kidney kidney
38 chr4:187124400-187126400 Enhancers Spleen Spleen
39 chr4:187124600-187125400 Weak transcription Pancreas Pancrea
40 chr4:187124600-187125600 Enhancers H1 Cell Line embryonic stem cell
41 chr4:187124600-187126000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr4:187124600-187126200 Active TSS Brain Anterior Caudate brain
43 chr4:187124600-187126200 Enhancers Fetal Stomach stomach
44 chr4:187124600-187127200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
45 chr4:187124800-187125600 Weak transcription Lung lung
46 chr4:187124800-187125800 Active TSS Left Ventricle heart
47 chr4:187124800-187126000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
48 chr4:187124800-187126000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr4:187124800-187126000 Active TSS Fetal Thymus thymus
50 chr4:187124800-187126000 Weak transcription Skeletal Muscle Male skeletal muscle

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