The 2.0 version of rSNPBase

Variant report

Variant rs547809128
Chromosome Location chr15:73995689-73995690
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:73978800-74000800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr15:73979400-73996400 Weak transcription A549 lung
3 chr15:73988800-73996200 Weak transcription H9 Cell Line embryonic stem cell
4 chr15:73989600-73996200 Weak transcription Duodenum Mucosa Duodenum
5 chr15:73989600-73996800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr15:73989800-73995800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr15:73989800-73996400 Weak transcription H1 Cell Line embryonic stem cell
8 chr15:73989800-73996800 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr15:73989800-73997000 Weak transcription Hela-S3 cervix
10 chr15:73989800-74000600 Weak transcription Esophagus oesophagus
11 chr15:73989800-74001600 Strong transcription Fetal Intestine Small intestine
12 chr15:73989800-74008800 Weak transcription Small Intestine intestine
13 chr15:73990000-73996200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr15:73990000-73997600 Weak transcription Fetal Kidney kidney
15 chr15:73990000-73999800 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr15:73990000-74012000 Weak transcription Fetal Brain Male brain
17 chr15:73990200-74007200 Weak transcription Stomach Mucosa stomach
18 chr15:73990200-74007600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr15:73990400-74007200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr15:73990400-74007600 Strong transcription Fetal Stomach stomach
21 chr15:73990600-73996800 Weak transcription Fetal Lung lung
22 chr15:73990600-73999400 Weak transcription Left Ventricle heart
23 chr15:73990600-74006600 Strong transcription Breast Myoepithelial Primary Cells Breast
24 chr15:73990600-74007400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr15:73990600-74018800 Weak transcription Right Atrium heart
26 chr15:73990800-73996200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr15:73990800-73996400 Weak transcription Rectal Smooth Muscle rectum
28 chr15:73990800-73996400 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr15:73990800-73997400 Weak transcription Brain Substantia Nigra brain
30 chr15:73990800-73997600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr15:73990800-74009200 Weak transcription Psoas Muscle Psoas
32 chr15:73991000-74003400 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr15:73991200-74001600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:73991400-74004800 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr15:73991400-74007200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr15:73991800-73997000 Weak transcription HSMMtube muscle
37 chr15:73992000-73997000 Weak transcription HSMM muscle
38 chr15:73992200-74007400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr15:73992600-73996800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
40 chr15:73992600-73997000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr15:73992600-74000600 Weak transcription Brain Angular Gyrus brain
42 chr15:73992600-74002400 Weak transcription Fetal Heart heart
43 chr15:73992600-74007400 Strong transcription Fetal Muscle Trunk muscle
44 chr15:73992800-73996400 Weak transcription Brain Anterior Caudate brain
45 chr15:73992800-73996600 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr15:73992800-73996600 Weak transcription HepG2 liver
47 chr15:73992800-73997000 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr15:73992800-73997000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr15:73992800-73997000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr15:73992800-73997400 Strong transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015