Variant report

Variant	rs547846398
Chromosome Location	chr4:124945279-124945280
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34581	chr4:124271321-125247395	Flanking Bivalent TSS/Enh Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
2	nsv830049	chr4:124793932-124955708	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv868977	chr4:124841128-125550637	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv879879	chr4:124893772-124971109	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	esv2526895	chr4:124942706-124945755	Weak transcription Enhancers	lncRNA	1 gene(s)	inside rSNPs	n/a
6	esv3357688	chr4:124943137-124945555	Weak transcription	lncRNA	1 gene(s)	inside rSNPs	n/a
7	esv1973109	chr4:124943366-124945342	Weak transcription	lncRNA	1 gene(s)	inside rSNPs	n/a
8	esv3403813	chr4:124943428-124945294	Weak transcription	lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:124940400-124946600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr4:124941400-124945400	Weak transcription	HSMMtube	muscle
3	chr4:124941400-124946200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr4:124941400-124948200	Weak transcription	Left Ventricle	heart
5	chr4:124941600-124945600	Weak transcription	Stomach Mucosa	stomach
6	chr4:124941600-124946200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr4:124941600-124949200	Weak transcription	Fetal Lung	lung
8	chr4:124941600-124950400	Weak transcription	Skeletal Muscle Male	skeletal muscle
9	chr4:124941800-124946000	Weak transcription	Fetal Heart	heart
10	chr4:124942400-124946400	Weak transcription	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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