Variant report

Variant rs547863427
Chromosome Location chr11:67770848-67770849
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:67766200-67771400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr11:67767800-67771200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr11:67769200-67771000 Flanking Active TSS Primary B cells from cord blood blood
4 chr11:67770000-67771000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr11:67770000-67771000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
6 chr11:67770000-67771000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
7 chr11:67770000-67771000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr11:67770000-67771800 Active TSS Rectal Smooth Muscle rectum
9 chr11:67770000-67772400 Enhancers Stomach Mucosa stomach
10 chr11:67770200-67771000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
11 chr11:67770200-67771800 Active TSS HUES6 Cell Line embryonic stem cell
12 chr11:67770200-67771800 Active TSS Brain Anterior Caudate brain
13 chr11:67770200-67772200 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
14 chr11:67770400-67771000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
15 chr11:67770400-67771000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
16 chr11:67770400-67771000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
17 chr11:67770400-67771000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr11:67770400-67771000 Flanking Active TSS Colonic Mucosa Colon
19 chr11:67770400-67771000 Flanking Active TSS Placenta Placenta
20 chr11:67770400-67771200 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr11:67770400-67771400 Weak transcription Fetal Heart heart
22 chr11:67770400-67771400 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
23 chr11:67770400-67771600 Active TSS Liver Liver
24 chr11:67770400-67771600 Active TSS Brain Cingulate Gyrus brain
25 chr11:67770400-67771600 Active TSS Brain Hippocampus Middle brain
26 chr11:67770400-67771800 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr11:67770400-67771800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
28 chr11:67770400-67771800 Active TSS iPS-20b Cell Line embryonic stem cell
29 chr11:67770400-67771800 Active TSS ES-UCSF4 Cell Line embryonic stem cell
30 chr11:67770400-67771800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr11:67770400-67771800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr11:67770400-67771800 Active TSS Brain Substantia Nigra brain
33 chr11:67770400-67771800 Active TSS Duodenum Smooth Muscle Duodenum
34 chr11:67770400-67771800 Active TSS NHLF lung
35 chr11:67770400-67772000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr11:67770400-67772000 Active TSS Brain Angular Gyrus brain
37 chr11:67770400-67772200 Active TSS iPS-15b Cell Line embryonic stem cell
38 chr11:67770400-67772200 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
39 chr11:67770400-67772200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr11:67770400-67772200 Active TSS HSMM muscle
41 chr11:67770400-67772600 Active TSS H9 Cell Line embryonic stem cell
42 chr11:67770600-67771000 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr11:67770600-67771000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr11:67770600-67771000 Flanking Active TSS Primary T cells fromperipheralblood blood
45 chr11:67770600-67771000 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
46 chr11:67770600-67771000 Flanking Bivalent TSS/Enh Fetal Brain Female brain
47 chr11:67770600-67771000 Flanking Active TSS Placenta Amnion Placenta Amnion
48 chr11:67770600-67771000 Flanking Active TSS HMEC breast
49 chr11:67770600-67771200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
50 chr11:67770600-67771600 Active TSS Primary monocytes fromperipheralblood blood

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