The 2.0 version of rSNPBase

Variant report

Variant rs547869017
Chromosome Location chr2:85966476-85966477
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85941200-85967400 Weak transcription Esophagus oesophagus
2 chr2:85959200-85968000 Weak transcription Fetal Heart heart
3 chr2:85960800-85968200 Weak transcription Right Ventricle heart
4 chr2:85961400-85967200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:85961600-85968000 Weak transcription Left Ventricle heart
6 chr2:85962400-85966600 Enhancers Fetal Stomach stomach
7 chr2:85962400-85968600 Enhancers Fetal Lung lung
8 chr2:85963000-85967200 Weak transcription Stomach Mucosa stomach
9 chr2:85963200-85968000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:85963200-85968400 Weak transcription Gastric stomach
11 chr2:85963400-85969200 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr2:85964200-85968800 Enhancers Brain Substantia Nigra brain
13 chr2:85964400-85968000 Weak transcription Hela-S3 cervix
14 chr2:85964400-85968200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr2:85964400-85968200 Weak transcription Colonic Mucosa Colon
16 chr2:85964400-85968200 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr2:85964400-85968600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr2:85964800-85968600 Enhancers Brain Cingulate Gyrus brain
19 chr2:85965000-85967400 Weak transcription Liver Liver
20 chr2:85965000-85973400 Enhancers Fetal Muscle Leg muscle
21 chr2:85965200-85968000 Weak transcription Stomach Smooth Muscle stomach
22 chr2:85965200-85968200 Weak transcription Rectal Smooth Muscle rectum
23 chr2:85965400-85967400 Weak transcription Aorta Aorta
24 chr2:85965400-85968200 Weak transcription HUVEC blood vessel
25 chr2:85965400-85968400 Weak transcription Osteobl bone
26 chr2:85965600-85967000 Weak transcription Brain Anterior Caudate brain
27 chr2:85965600-85967200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr2:85965600-85967400 Weak transcription Adipose Nuclei Adipose
29 chr2:85965600-85967800 Weak transcription Muscle Satellite Cultured Cells --
30 chr2:85965600-85967800 Weak transcription Colon Smooth Muscle Colon
31 chr2:85965600-85968000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:85965600-85968000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:85965800-85966600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr2:85965800-85967400 Weak transcription Ovary ovary
35 chr2:85965800-85968000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:85965800-85968000 Weak transcription HSMM muscle
37 chr2:85966000-85967000 Weak transcription Brain Hippocampus Middle brain
38 chr2:85966000-85967000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr2:85966000-85967200 Weak transcription Brain Angular Gyrus brain
40 chr2:85966000-85967200 Weak transcription Psoas Muscle Psoas
41 chr2:85966000-85967200 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr2:85966000-85968000 Weak transcription Fetal Muscle Trunk muscle
43 chr2:85966000-85968000 Weak transcription NHLF lung
44 chr2:85966200-85967000 Weak transcription A549 lung
45 chr2:85966200-85967400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr2:85966200-85968000 Weak transcription NHDF-Ad bronchial
47 chr2:85966200-85968200 Weak transcription HSMMtube muscle
48 chr2:85966200-85968400 Weak transcription Spleen Spleen
49 chr2:85966400-85966600 Enhancers Brain Germinal Matrix brain
50 chr2:85966400-85966800 Weak transcription Lung lung

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Last update: Aug 31, 2015