Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	IRF4	chr12:103507898-103508898	GM12878	blood:	n/a	n/a
2	ATF2	chr12:103507916-103508908	GM12878	blood:	n/a	n/a
3	RCOR1	chr12:103507834-103508934	GM12878	blood:	n/a	n/a
4	IRF4	chr12:103507910-103508863	GM12878	blood:	n/a	n/a
5	EBF1	chr12:103507350-103508995	GM12878	blood:	n/a	chr12:103508293-103508304
6	CUX1	chr12:103507778-103508861	GM12878	blood:	n/a	n/a
7	NFATC1	chr12:103507939-103508834	GM12878	blood:	n/a	n/a
8	NFIC	chr12:103507913-103509164	GM12878	blood:	n/a	n/a
9	EBF1	chr12:103507946-103508855	GM12878	blood:	n/a	chr12:103508293-103508304
10	CEBPB	chr12:103507916-103508641	GM12878	blood:	n/a	n/a
11	ATF2	chr12:103507953-103508895	GM12878	blood:	n/a	n/a
12	SPI1	chr12:103507708-103508909	GM12878	blood:	n/a	n/a
13	PML	chr12:103507960-103509016	GM12878	blood:	n/a	chr12:103508655-103508664
14	EP300	chr12:103507762-103508895	GM12878	blood:	n/a	chr12:103508657-103508666
15	MAZ	chr12:103507827-103508729	GM12878	blood:	n/a	chr12:103508657-103508666
16	MTA3	chr12:103507899-103508918	GM12878	blood:	n/a	n/a
17	RUNX3	chr12:103507930-103508874	GM12878	blood:	n/a	n/a
18	RUNX3	chr12:103507874-103508891	GM12878	blood:	n/a	n/a
19	MTA3	chr12:103507916-103508923	GM12878	blood:	n/a	n/a
20	POU2F2	chr12:103507933-103508915	GM12878	blood:	n/a	n/a
21	NFIC	chr12:103507928-103508859	GM12878	blood:	n/a	n/a
22	FOXM1	chr12:103507942-103509010	GM12878	blood:	n/a	n/a

Variant related genes	Relation type
RNU7-184P	TF binding region

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832501	chr12:103463927-103648825	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
2	esv1824379	chr12:103501562-103549931	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103507200-103508000	Enhancers	GM12878-XiMat	blood

Quick Search:

Input of quick search could be: