Variant report

Variant	rs547995795
Chromosome Location	chr21:16262192-16262193
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr21:16253232..16256075-chr21:16260116..16262916,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000235609	Chromatin interaction

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3449026	chr21:16262081-16265479	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:16249200-16264600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr21:16259400-16262200	Enhancers	Liver	Liver
3	chr21:16259400-16262600	Enhancers	Fetal Intestine Small	intestine
4	chr21:16259600-16262800	Enhancers	Fetal Intestine Large	intestine
5	chr21:16260000-16262200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr21:16260000-16264600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr21:16260600-16262600	Enhancers	HMEC	breast
8	chr21:16261000-16262200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr21:16261000-16262400	Enhancers	Osteobl	bone
10	chr21:16261200-16262600	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr21:16261200-16263400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr21:16261400-16263000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr21:16261400-16267000	Weak transcription	Fetal Muscle Leg	muscle
14	chr21:16261600-16262200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr21:16261800-16262200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr21:16261800-16265200	Weak transcription	Dnd41	blood
17	chr21:16262000-16262800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr21:16262000-16263000	Enhancers	HepG2	liver
19	chr21:16262000-16263400	Weak transcription	Sigmoid Colon	Sigmoid Colon
20	chr21:16262000-16284200	Weak transcription	Primary hematopoietic stem cells	blood

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