Variant report

Variant	rs548009994
Chromosome Location	chr2:125655378-125655379
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv834361	chr2:125601081-125810992	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
3	esv3458260	chr2:125651642-125659182	Enhancers	n/a	n/a	inside rSNPs	diseases
4	esv3458258	chr2:125651653-125659145	Enhancers	n/a	n/a	inside rSNPs	diseases
5	esv3458259	chr2:125651697-125659110	Enhancers	n/a	n/a	inside rSNPs	diseases
6	esv3458261	chr2:125651697-125659110	Enhancers	n/a	n/a	inside rSNPs	diseases
7	nsv979363	chr2:125651759-125658722	Enhancers	n/a	n/a	inside rSNPs	diseases
8	nsv441780	chr2:125651932-125658358	Enhancers	n/a	n/a	inside rSNPs	diseases
9	esv1796915	chr2:125651932-125658362	Enhancers	n/a	n/a	inside rSNPs	diseases
10	esv2421661	chr2:125651932-125658362	Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv2760625	chr2:125651932-125658362	Enhancers	n/a	n/a	inside rSNPs	diseases
12	nsv514089	chr2:125652474-125658162	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125655000-125655400	Enhancers	Breast Myoepithelial Primary Cells	Breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links