Variant report

Variant rs548064461
Chromosome Location chr1:85230308-85230309
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85204200-85230400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:85225800-85233600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:85226000-85230400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:85228600-85230400 Enhancers Brain Germinal Matrix brain
5 chr1:85228800-85238200 Weak transcription Stomach Mucosa stomach
6 chr1:85229200-85230600 Enhancers Fetal Brain Female brain
7 chr1:85229400-85230600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:85229400-85230600 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr1:85229400-85230600 Enhancers Cortex derived primary cultured neurospheres brain
10 chr1:85229400-85230800 Enhancers HUES48 Cell Line embryonic stem cell
11 chr1:85229400-85230800 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr1:85229400-85230800 Enhancers Brain Anterior Caudate brain
13 chr1:85229600-85230400 Enhancers HMEC breast
14 chr1:85229600-85230800 Enhancers H1 Cell Line embryonic stem cell
15 chr1:85229600-85230800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:85229800-85230400 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
17 chr1:85229800-85230400 Enhancers Placenta Placenta
18 chr1:85230000-85230400 Flanking Bivalent TSS/Enh HUES64 Cell Line embryonic stem cell
19 chr1:85230000-85230600 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
20 chr1:85230000-85230600 Enhancers Brain Cingulate Gyrus brain
21 chr1:85230000-85230600 Flanking Active TSS Brain Hippocampus Middle brain
22 chr1:85230000-85230600 Enhancers Fetal Brain Male brain
23 chr1:85230000-85230800 Active TSS Brain Inferior Temporal Lobe brain
24 chr1:85230000-85231200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:85230000-85231400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
26 chr1:85230000-85231800 Weak transcription Fetal Heart heart
27 chr1:85230200-85230400 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
28 chr1:85230200-85230400 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:85230200-85230400 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
30 chr1:85230200-85230400 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:85230200-85230600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell

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