Variant report

Variant rs548068996
Chromosome Location chr1:10704131-10704132
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:10651600-10715800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:10691600-10706000 Weak transcription Dnd41 blood
3 chr1:10697400-10722000 Strong transcription Sigmoid Colon Sigmoid Colon
4 chr1:10698200-10713600 Weak transcription Small Intestine intestine
5 chr1:10698600-10705600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr1:10698800-10704600 Weak transcription Primary B cells from cord blood blood
7 chr1:10698800-10704600 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr1:10698800-10726400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:10698800-10752000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:10699000-10712400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:10699000-10713600 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr1:10699000-10714000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr1:10699000-10723000 Weak transcription Psoas Muscle Psoas
14 chr1:10699400-10709600 Strong transcription Duodenum Mucosa Duodenum
15 chr1:10699400-10709800 Strong transcription Colonic Mucosa Colon
16 chr1:10700000-10704600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:10700000-10706200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr1:10700000-10707600 Weak transcription Primary T cells from cord blood blood
19 chr1:10700200-10708600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:10700200-10709400 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:10700400-10722800 Weak transcription Ovary ovary
22 chr1:10701000-10706200 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr1:10701200-10705600 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr1:10701200-10706200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:10701200-10706200 Weak transcription Right Atrium heart
26 chr1:10701400-10708600 Weak transcription Adipose Nuclei Adipose
27 chr1:10701400-10708800 Weak transcription Brain Germinal Matrix brain
28 chr1:10701400-10709400 Strong transcription Rectal Mucosa Donor 31 rectum
29 chr1:10701600-10705400 Strong transcription Liver Liver
30 chr1:10701600-10709400 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr1:10701600-10709800 Strong transcription Pancreas Pancrea
32 chr1:10701800-10704200 Genic enhancers Stomach Smooth Muscle stomach
33 chr1:10701800-10704600 Weak transcription Rectal Smooth Muscle rectum
34 chr1:10701800-10706200 Strong transcription Left Ventricle heart
35 chr1:10701800-10708200 Strong transcription Aorta Aorta
36 chr1:10701800-10709400 Strong transcription Fetal Intestine Small intestine
37 chr1:10702000-10704400 Genic enhancers Breast Myoepithelial Primary Cells Breast
38 chr1:10702000-10704600 Strong transcription Skeletal Muscle Male skeletal muscle
39 chr1:10702000-10706400 Strong transcription Thymus Thymus
40 chr1:10702200-10704400 ZNF genes & repeats Fetal Stomach stomach
41 chr1:10702200-10704400 Weak transcription Stomach Mucosa stomach
42 chr1:10702200-10706200 Strong transcription Gastric stomach
43 chr1:10702200-10706200 Strong transcription Right Ventricle heart
44 chr1:10702200-10709800 Strong transcription Fetal Intestine Large intestine
45 chr1:10702600-10706600 Strong transcription Fetal Adrenal Gland Adrenal Gland
46 chr1:10702600-10707200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:10702600-10721600 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr1:10703000-10704400 Genic enhancers Lung lung
49 chr1:10703000-10704800 Bivalent Enhancer Fetal Muscle Trunk muscle
50 chr1:10703000-10706200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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