Variant report

Variant	rs548128737
Chromosome Location	chr6:73846225-73846226
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3410973	chr6:73716033-74419545	Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
2	nsv519218	chr6:73845299-73862856	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:73818000-73846400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr6:73821000-73849800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr6:73839200-73854400	Weak transcription	Aorta	Aorta
4	chr6:73839800-73852400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr6:73840200-73848000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr6:73840200-73848200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:73840400-73848000	Weak transcription	NHEK	skin
8	chr6:73841400-73846400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
9	chr6:73842000-73855600	Weak transcription	HSMM	muscle
10	chr6:73843600-73846400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr6:73844400-73867000	Weak transcription	Primary hematopoietic stem cells	blood
12	chr6:73844600-73847600	Weak transcription	GM12878-XiMat	blood
13	chr6:73844600-73849800	Weak transcription	Skeletal Muscle Male	skeletal muscle
14	chr6:73844600-73865200	Weak transcription	Primary T cells from cord blood	blood
15	chr6:73844800-73846800	Weak transcription	NHLF	lung
16	chr6:73844800-73866400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr6:73845000-73846400	Strong transcription	Primary B cells from cord blood	blood
18	chr6:73845400-73847800	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr6:73846000-73866400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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