Variant report

Variant	rs548305569
Chromosome Location	chr12:58708898-58708899
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899124	chr12:58391839-58883507	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv730	chr12:58698792-58759096	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1035772	chr12:58708608-58732055	Active TSS Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:58705400-58709000	Enhancers	HUVEC	blood vessel
2	chr12:58705400-58710000	Weak transcription	Fetal Intestine Large	intestine
3	chr12:58706200-58709200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr12:58706200-58709400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr12:58706400-58709000	Enhancers	Osteobl	bone
6	chr12:58706800-58709000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr12:58706800-58709000	Enhancers	NHDF-Ad	bronchial
8	chr12:58706800-58709200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr12:58707400-58709200	Enhancers	Muscle Satellite Cultured Cells	--
10	chr12:58707400-58709200	Enhancers	NH-A	brain
11	chr12:58708200-58709000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr12:58708200-58709000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr12:58708200-58709200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
14	chr12:58708400-58709000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr12:58708800-58709000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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