Variant report

Variant rs548346041
Chromosome Location chr10:712395-712396
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:698400-723800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr10:708000-713200 Weak transcription Esophagus oesophagus
3 chr10:708000-713200 Weak transcription Psoas Muscle Psoas
4 chr10:708400-713000 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr10:708400-716000 Weak transcription H9 Cell Line embryonic stem cell
6 chr10:708400-716000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr10:708400-716000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr10:709000-713200 Weak transcription Gastric stomach
9 chr10:709200-713400 Weak transcription Fetal Heart heart
10 chr10:709200-716000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr10:709600-713000 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr10:709800-716000 Weak transcription Spleen Spleen
13 chr10:710200-713000 Weak transcription Fetal Brain Female brain
14 chr10:710200-713000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr10:710200-713200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr10:710200-723800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr10:710400-712400 Weak transcription Stomach Smooth Muscle stomach
18 chr10:710400-713000 Weak transcription Left Ventricle heart
19 chr10:710600-713600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr10:711000-718000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr10:711200-713200 Weak transcription Brain Substantia Nigra brain
22 chr10:711400-712400 Enhancers Fetal Brain Male brain
23 chr10:711400-712800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
24 chr10:711600-712400 Enhancers Brain Hippocampus Middle brain
25 chr10:711600-716000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr10:711800-712400 Bivalent Enhancer Fetal Muscle Trunk muscle
27 chr10:711800-712400 Enhancers Lung lung
28 chr10:711800-713200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
29 chr10:711800-713200 Weak transcription Brain Angular Gyrus brain
30 chr10:712000-712400 Weak transcription Fetal Stomach stomach
31 chr10:712000-713000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr10:712000-713200 Weak transcription Brain Cingulate Gyrus brain
33 chr10:712000-713400 Weak transcription Fetal Kidney kidney
34 chr10:712000-713400 Weak transcription Right Atrium heart
35 chr10:712000-713600 Weak transcription Duodenum Mucosa Duodenum
36 chr10:712000-714200 Enhancers Right Ventricle heart
37 chr10:712000-714400 Enhancers Pancreas Pancrea
38 chr10:712000-714800 Weak transcription Stomach Mucosa stomach
39 chr10:712000-716000 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr10:712000-723600 Weak transcription Aorta Aorta
41 chr10:712000-723800 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr10:712200-712400 Enhancers Adipose Nuclei Adipose
43 chr10:712200-712400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
44 chr10:712200-712400 Enhancers Fetal Muscle Leg muscle
45 chr10:712200-712400 Enhancers Fetal Thymus thymus
46 chr10:712200-712400 Flanking Active TSS NHLF lung
47 chr10:712200-712600 Enhancers Fetal Lung lung
48 chr10:712200-713200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr10:712200-713200 Weak transcription Ovary ovary
50 chr10:712200-713400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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