Variant report

Variant	rs548420962
Chromosome Location	chr4:3463182-3463183
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAX	chr4:3462899-3463986	ECC-1	luminal epithelium:	n/a	chr4:3463505-3463515
2	SRF	chr4:3463068-3463676	ECC-1	luminal epithelium:	n/a	n/a
3	FOXM1	chr4:3462943-3463876	ECC-1	luminal epithelium:	n/a	n/a
4	TCF7L2	chr4:3462941-3463332	PANC-1	pancreas:	n/a	n/a
5	MAX	chr4:3462710-3464127	ECC-1	luminal epithelium:	n/a	chr4:3463505-3463515
6	TAF1	chr4:3462910-3463634	ECC-1	luminal epithelium:	n/a	n/a
7	MYC	chr4:3463122-3463692	MCF-7	breast:	n/a	chr4:3463505-3463515
8	ESR1	chr4:3462786-3463795	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
9	GATA3	chr4:3462984-3464037	MCF-7	breast:	n/a	n/a
10	ESR1	chr4:3463040-3463661	T-47D	breast:	n/a	chr4:3463573-3463590 chr4:3463204-3463221
11	EGR1	chr4:3463109-3463858	MCF-7	breast:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
12	EP300	chr4:3463064-3463712	T-47D	breast:	n/a	chr4:3463503-3463512
13	ZBTB7A	chr4:3463080-3466336	ECC-1	luminal epithelium:	n/a	chr4:3465630-3465638 chr4:3465446-3465454 chr4:3465563-3465571
14	EGR1	chr4:3463095-3463902	ECC-1	luminal epithelium:	n/a	chr4:3463507-3463521 chr4:3463632-3463642 chr4:3463630-3463643 chr4:3463629-3463644 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463509-3463519 chr4:3463509-3463520 chr4:3463506-3463516 chr4:3463633-3463642 chr4:3463508-3463521 chr4:3463630-3463643 chr4:3463508-3463521 chr4:3463508-3463521
15	ESR1	chr4:3462706-3463803	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
16	TCF7L2	chr4:3462802-3463666	MCF-7	breast:	n/a	chr4:3462927-3462934
17	NFIC	chr4:3462838-3463887	ECC-1	luminal epithelium:	n/a	n/a
18	ESR1	chr4:3462628-3463956	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
19	MYC	chr4:3463149-3463520	MCF-7	breast:	n/a	chr4:3463505-3463515
20	NR2F2	chr4:3463052-3463988	MCF-7	breast:	n/a	n/a
21	YY1	chr4:3463074-3463661	ECC-1	luminal epithelium:	n/a	chr4:3463504-3463518
22	TEAD4	chr4:3463004-3463763	ECC-1	luminal epithelium:	n/a	n/a
23	RFX5	chr4:3463176-3463491	Hela-S3	cervix:	n/a	n/a
24	ESR1	chr4:3463063-3463626	T-47D	breast:	n/a	chr4:3463573-3463590 chr4:3463204-3463221
25	SMC3	chr4:3463166-3463576	Hela-S3	cervix:	n/a	n/a
26	TCF12	chr4:3462795-3464245	MCF-7	breast:	n/a	n/a
27	GATA3	chr4:3463008-3463847	MCF-7	breast:	n/a	n/a
28	HDAC2	chr4:3463021-3463689	MCF-7	breast:	n/a	n/a
29	HDAC2	chr4:3463071-3463747	MCF-7	breast:	n/a	n/a
30	HA-E2F1	chr4:3462979-3463892	MCF-7	breast:	n/a	chr4:3463507-3463516
31	TCF12	chr4:3462824-3464072	ECC-1	luminal epithelium:	n/a	n/a
32	FOXA1	chr4:3463137-3463571	T-47D	breast:	n/a	n/a
33	MXI1	chr4:3463145-3463410	Hela-S3	cervix:	n/a	n/a
34	EP300	chr4:3462963-3463915	ECC-1	luminal epithelium:	n/a	chr4:3463503-3463512
35	TCF12	chr4:3463081-3463893	MCF-7	breast:	n/a	n/a
36	ESR1	chr4:3463049-3463654	T-47D	breast:	n/a	chr4:3463573-3463590 chr4:3463204-3463221
37	MAZ	chr4:3463145-3463586	Hela-S3	cervix:	n/a	chr4:3463505-3463515
38	POLR2A	chr4:3463027-3463549	ECC-1	luminal epithelium:	n/a	n/a
39	YY1	chr4:3463099-3463670	ECC-1	luminal epithelium:	n/a	chr4:3463504-3463518
40	POLR2A	chr4:3463132-3463547	PANC-1	pancreas:	n/a	n/a
41	EP300	chr4:3462863-3464003	ECC-1	luminal epithelium:	n/a	chr4:3463503-3463512
42	SIN3AK20	chr4:3462804-3463968	MCF-7	breast:	n/a	n/a
43	ESR1	chr4:3462637-3463898	ECC-1	luminal epithelium:	n/a	chr4:3463573-3463590 chr4:3463204-3463221 chr4:3462898-3462913
44	TFAP2A	chr4:3463066-3463658	Hela-S3	cervix:	n/a	n/a
45	EP300	chr4:3462932-3463859	MCF-7	breast:	n/a	chr4:3463503-3463512
46	MYC	chr4:3463149-3463532	MCF-7	breast:	n/a	chr4:3463505-3463515
47	FOXM1	chr4:3462834-3464004	MCF-7	breast:	n/a	n/a
48	ESR1	chr4:3463017-3463695	T-47D	breast:	n/a	chr4:3463573-3463590 chr4:3463204-3463221
49	TFAP2C	chr4:3463065-3463699	Hela-S3	cervix:	n/a	n/a
50	NFIC	chr4:3462880-3463976	ECC-1	luminal epithelium:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:3288141..3289800-chr4:3461769..3463366,2	MCF-7	breast:
2	chr4:3076153..3077682-chr4:3463023..3464527,2	MCF-7	breast:
3	chr4:3110927..3117533-chr4:3461507..3465762,15	MCF-7	breast:
4	chr11:61737950..61740369-chr4:3461504..3464468,2	MCF-7	breast:
5	chr4:3292471..3295854-chr4:3462941..3467927,8	MCF-7	breast:
6	chr4:3346041..3348825-chr4:3461682..3464499,2	MCF-7	breast:
7	chr4:3428894..3431544-chr4:3462169..3465013,2	MCF-7	breast:
8	chr4:3462755..3463804-chr4:3486304..3487219,5	MCF-7	breast:
9	chr4:3462755..3463727-chr4:3486334..3487219,3	MCF-7	breast:
10	chr4:3462844..3463532-chr4:3486166..3487066,3	MCF-7	breast:
11	chr4:3365688..3366496-chr4:3463170..3464043,2	MCF-7	breast:
12	chr4:3343221..3349626-chr4:3462156..3471133,16	MCF-7	breast:
13	chr4:3438186..3441523-chr4:3461903..3464658,4	MCF-7	breast:

Variant related genes	Relation type
DOK7	TF binding region
ENSG00000197386	Chromatin interaction
ENSG00000251075	Chromatin interaction
ENSG00000175920	Chromatin interaction
ENSG00000159788	Chromatin interaction

Extended variants
information (count: 46 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:46 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878456	chr4:3215835-3467519	Enhancers Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv428106	chr4:3226182-3752322	Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
3	nsv878462	chr4:3311548-3505448	Strong transcription Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
4	nsv1007847	chr4:3317904-3527357	Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
5	nsv537001	chr4:3317904-3527357	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
6	nsv878463	chr4:3363994-3498896	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
7	nsv428435	chr4:3386773-3623321	Enhancers Strong transcription Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv933265	chr4:3392824-4283640	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	60 gene(s)	inside rSNPs	diseases
9	esv2757918	chr4:3394344-4350986	Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
10	esv2759219	chr4:3394344-4350986	Weak transcription Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
11	nsv878464	chr4:3405165-3505448	Bivalent Enhancer Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
12	nsv878465	chr4:3405165-3566567	Strong transcription Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
13	esv1791851	chr4:3407753-3534022	Bivalent Enhancer Enhancers Strong transcription Bivalent/Poised TSS Weak transcription Genic enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
14	nsv1000383	chr4:3412585-3839781	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
15	nsv878468	chr4:3413209-3471754	Weak transcription Strong transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
16	nsv878469	chr4:3413209-3566567	Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
17	nsv878470	chr4:3413209-3566567	Weak transcription Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
18	nsv878471	chr4:3413209-3884998	Bivalent Enhancer Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
19	nsv878473	chr4:3414654-3473139	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
20	esv1816543	chr4:3414654-3942867	Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
21	nsv1001328	chr4:3421979-3654381	Bivalent/Poised TSS Enhancers Bivalent Enhancer Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
22	nsv878474	chr4:3422211-3504562	Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
23	nsv1008575	chr4:3429062-3487322	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
24	nsv967719	chr4:3429579-3535969	Genic enhancers Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
25	nsv470004	chr4:3429856-3584373	Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
26	nsv878475	chr4:3431342-3504562	Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
27	nsv516505	chr4:3434336-3504562	Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
28	nsv1011554	chr4:3436478-3975772	ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
29	nsv537002	chr4:3436478-3975772	Weak transcription Flanking Active TSS Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
30	nsv878476	chr4:3436588-3504562	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
31	nsv10424	chr4:3437534-3468325	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
32	nsv878477	chr4:3438643-3584059	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
33	nsv4202	chr4:3439530-3484873	Bivalent Enhancer Active TSS Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
34	nsv829840	chr4:3444216-3623031	Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	24 gene(s)	inside rSNPs	diseases
35	nsv878478	chr4:3447243-3566567	Bivalent Enhancer Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
36	nsv1002774	chr4:3450810-3577017	Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
37	nsv1012371	chr4:3450810-3878976	Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
38	nsv537003	chr4:3450810-3878976	Active TSS Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
39	nsv998670	chr4:3453787-3909535	Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
40	esv3404372	chr4:3461704-3464502	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
41	nsv878479	chr4:3461900-3498896	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Weak transcription Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
42	nsv878480	chr4:3461900-3504562	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
43	nsv878481	chr4:3461900-3566567	Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
44	nsv878482	chr4:3461900-3573260	Bivalent Enhancer Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	21 gene(s)	inside rSNPs	diseases
45	nsv878483	chr4:3461900-3683269	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
46	nsv1008394	chr4:3462618-3577017	Weak transcription Enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:3462000-3463800	Enhancers	HSMMtube	muscle
2	chr4:3462000-3464000	Enhancers	Fetal Muscle Leg	muscle
3	chr4:3462400-3463600	Enhancers	HSMM	muscle
4	chr4:3462400-3463800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
5	chr4:3462400-3464800	Enhancers	Pancreas	Pancrea
6	chr4:3462600-3463200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr4:3462600-3464000	Enhancers	Stomach Mucosa	stomach
8	chr4:3462600-3464200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:3462600-3464200	Enhancers	Stomach Smooth Muscle	stomach
10	chr4:3462600-3464600	Enhancers	Gastric	stomach
11	chr4:3462600-3464600	Enhancers	Right Ventricle	heart
12	chr4:3462600-3464800	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr4:3462600-3464800	Enhancers	Fetal Heart	heart
14	chr4:3462600-3464800	Enhancers	Left Ventricle	heart
15	chr4:3462600-3465000	Enhancers	HMEC	breast
16	chr4:3462600-3465800	Enhancers	Liver	Liver
17	chr4:3462800-3463200	Bivalent Enhancer	NHEK	skin
18	chr4:3462800-3463400	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr4:3462800-3463800	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr4:3462800-3463800	Bivalent Enhancer	Muscle Satellite Cultured Cells	--
21	chr4:3462800-3463800	Enhancers	Aorta	Aorta
22	chr4:3462800-3463800	Enhancers	Esophagus	oesophagus
23	chr4:3462800-3464400	Enhancers	Lung	lung
24	chr4:3462800-3464800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
25	chr4:3463000-3463200	Bivalent/Poised TSS	HepG2	liver
26	chr4:3463000-3463400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr4:3463000-3463400	Flanking Active TSS	Hela-S3	cervix
28	chr4:3463000-3464000	Enhancers	Duodenum Mucosa	Duodenum
29	chr4:3463000-3464000	Enhancers	Psoas Muscle	Psoas
30	chr4:3463000-3464800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr4:3463000-3464800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle

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