Variant report

Variant	rs548441421
Chromosome Location	chr14:68674564-68674565
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:68673468..68675267-chr14:68712695..68715486,2	MCF-7	breast:
2	chr14:68661189..68664435-chr14:68673006..68675908,3	MCF-7	breast:
3	chr14:68658282..68660855-chr14:68673149..68675091,2	MCF-7	breast:
4	chr14:68670172..68671900-chr14:68673341..68675204,2	MCF-7	breast:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869154	chr14:68366754-69041768	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv428628	chr14:68674504-68835127	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68647000-68676600	Weak transcription	Primary B cells from cord blood	blood
2	chr14:68649400-68677000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:68651200-68675000	Weak transcription	Primary hematopoietic stem cells	blood
4	chr14:68666600-68675000	Weak transcription	Ovary	ovary
5	chr14:68666600-68675200	Weak transcription	Thymus	Thymus
6	chr14:68666800-68675000	Weak transcription	Primary T cells from cord blood	blood
7	chr14:68667000-68674600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr14:68667000-68675600	Weak transcription	Stomach Mucosa	stomach
9	chr14:68670800-68675000	Weak transcription	Small Intestine	intestine
10	chr14:68671000-68674800	Weak transcription	Adipose Nuclei	Adipose
11	chr14:68671000-68675000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr14:68672800-68676800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr14:68674000-68674600	Enhancers	Aorta	Aorta
14	chr14:68674000-68675000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr14:68674000-68677000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr14:68674000-68677200	Enhancers	Osteobl	bone
17	chr14:68674000-68679200	Enhancers	Breast Myoepithelial Primary Cells	Breast
18	chr14:68674200-68675600	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr14:68674200-68677000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr14:68674200-68677000	Enhancers	NHDF-Ad	bronchial
21	chr14:68674200-68677200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr14:68674400-68674800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
23	chr14:68674400-68677000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr14:68674400-68677000	Enhancers	Muscle Satellite Cultured Cells	--

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