The 2.0 version of rSNPBase

Variant report

Variant rs548472026
Chromosome Location chr11:86145703-86145704
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:86118200-86151000 Weak transcription Skeletal Muscle Female skeletal muscle
2 chr11:86136800-86170200 Weak transcription Fetal Heart heart
3 chr11:86138600-86167400 Weak transcription Fetal Lung lung
4 chr11:86140800-86153400 Weak transcription Right Ventricle heart
5 chr11:86140800-86155800 Weak transcription Psoas Muscle Psoas
6 chr11:86141000-86153400 Weak transcription Brain Anterior Caudate brain
7 chr11:86141200-86149800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr11:86141400-86149600 Weak transcription Muscle Satellite Cultured Cells --
9 chr11:86142000-86151400 Weak transcription Adipose Nuclei Adipose
10 chr11:86142000-86153600 Weak transcription Brain Angular Gyrus brain
11 chr11:86142000-86167400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:86142400-86151200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr11:86142600-86151200 Weak transcription Fetal Stomach stomach
14 chr11:86142600-86153400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr11:86142600-86155000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr11:86142600-86156000 Weak transcription Spleen Spleen
17 chr11:86142800-86146600 Weak transcription Aorta Aorta
18 chr11:86142800-86151000 Weak transcription Stomach Smooth Muscle stomach
19 chr11:86142800-86152000 Weak transcription Brain Germinal Matrix brain
20 chr11:86142800-86157600 Weak transcription Gastric stomach
21 chr11:86143000-86153400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr11:86143400-86151400 Weak transcription NH-A brain
23 chr11:86143600-86148200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr11:86143600-86151000 Weak transcription Fetal Muscle Leg muscle
25 chr11:86143600-86151000 Weak transcription Left Ventricle heart
26 chr11:86143600-86151400 Weak transcription Primary hematopoietic stem cells blood
27 chr11:86143600-86153600 Weak transcription Fetal Intestine Small intestine
28 chr11:86143800-86151200 Weak transcription Fetal Brain Female brain
29 chr11:86144200-86146800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr11:86145000-86151400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:86145200-86146000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr11:86145200-86146400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr11:86145200-86146800 Weak transcription Lung lung
34 chr11:86145200-86150600 Weak transcription Ovary ovary
35 chr11:86145200-86151600 Weak transcription Fetal Brain Male brain
36 chr11:86145200-86153200 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr11:86145400-86146000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr11:86145400-86167400 Weak transcription Pancreas Pancrea
39 chr11:86145600-86147200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015