The 2.0 version of rSNPBase

Variant report

Variant rs548584373
Chromosome Location chr3:160520846-160520847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:160498400-160522600 Weak transcription Right Ventricle heart
2 chr3:160509000-160522600 Weak transcription iPS-20b Cell Line embryonic stem cell
3 chr3:160513400-160522600 Weak transcription Pancreas Pancrea
4 chr3:160514400-160522600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr3:160515400-160526400 Weak transcription H9 Cell Line embryonic stem cell
6 chr3:160518800-160522800 Weak transcription Fetal Muscle Trunk muscle
7 chr3:160519000-160521000 Enhancers Primary Natural Killer cells fromperipheralblood blood
8 chr3:160519200-160521000 Enhancers HUES6 Cell Line embryonic stem cell
9 chr3:160519200-160521000 Enhancers Rectal Mucosa Donor 31 rectum
10 chr3:160519200-160521000 Enhancers Sigmoid Colon Sigmoid Colon
11 chr3:160519600-160521000 Enhancers Primary monocytes fromperipheralblood blood
12 chr3:160519600-160522400 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr3:160519800-160521000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:160520000-160521000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:160520000-160521000 Enhancers Psoas Muscle Psoas
16 chr3:160520000-160521000 Enhancers Right Atrium heart
17 chr3:160520200-160521000 Enhancers Primary T cells from cord blood blood
18 chr3:160520200-160521000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr3:160520200-160521000 Enhancers Colon Smooth Muscle Colon
20 chr3:160520200-160521000 Enhancers Duodenum Smooth Muscle Duodenum
21 chr3:160520200-160521200 Enhancers Monocytes-CD14+_RO01746 blood
22 chr3:160520200-160522600 Weak transcription Brain Hippocampus Middle brain
23 chr3:160520200-160522600 Weak transcription Brain Inferior Temporal Lobe brain
24 chr3:160520200-160522600 Weak transcription Fetal Brain Female brain
25 chr3:160520200-160525800 Weak transcription Liver Liver
26 chr3:160520200-160526000 Weak transcription Aorta Aorta
27 chr3:160520200-160526000 Weak transcription Brain Angular Gyrus brain
28 chr3:160520200-160526400 Weak transcription Stomach Mucosa stomach
29 chr3:160520400-160521000 Enhancers Skeletal Muscle Male skeletal muscle
30 chr3:160520400-160521000 Enhancers Skeletal Muscle Female skeletal muscle
31 chr3:160520400-160521000 Enhancers Stomach Smooth Muscle stomach
32 chr3:160520400-160522000 Weak transcription Fetal Heart heart
33 chr3:160520400-160522400 Weak transcription Muscle Satellite Cultured Cells --
34 chr3:160520400-160522400 Weak transcription Rectal Smooth Muscle rectum
35 chr3:160520400-160522600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr3:160520400-160522600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr3:160520400-160522600 Weak transcription Gastric stomach
38 chr3:160520400-160522600 Weak transcription Left Ventricle heart
39 chr3:160520400-160522600 Weak transcription Lung lung
40 chr3:160520400-160522600 Weak transcription NHDF-Ad bronchial
41 chr3:160520400-160526400 Weak transcription Brain Anterior Caudate brain
42 chr3:160520400-160529600 Weak transcription Colonic Mucosa Colon
43 chr3:160520600-160522400 Weak transcription Adipose Nuclei Adipose
44 chr3:160520800-160521000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr3:160520800-160521000 Enhancers iPS-15b Cell Line embryonic stem cell
46 chr3:160520800-160521000 Enhancers Placenta Placenta
47 chr3:160520800-160522600 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015