Variant report

Variant rs548612513
Chromosome Location chr21:46321804-46321805
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46295600-46338800 Weak transcription Right Atrium heart
2 chr21:46298400-46326600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr21:46305400-46322400 Strong transcription Dnd41 blood
4 chr21:46305400-46325000 Strong transcription Primary T regulatory cells fromperipheralblood blood
5 chr21:46313800-46324800 Strong transcription Primary T helper naive cells fromperipheralblood blood
6 chr21:46313800-46326600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr21:46313800-46326800 Strong transcription Fetal Thymus thymus
8 chr21:46314200-46323000 Strong transcription Thymus Thymus
9 chr21:46314400-46322200 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr21:46314400-46330200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr21:46314600-46324800 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr21:46315800-46322400 Strong transcription Primary hematopoietic stem cells short term culture blood
13 chr21:46316000-46324400 Weak transcription H9 Cell Line embryonic stem cell
14 chr21:46316400-46324000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr21:46316600-46327200 Strong transcription Primary T cells from cord blood blood
16 chr21:46317200-46324800 Strong transcription Primary T killer memory cells from peripheral blood blood
17 chr21:46317600-46324200 Strong transcription Primary T helper naive cells from peripheral blood blood
18 chr21:46317800-46324200 Strong transcription Primary T killer naive cells fromperipheralblood blood
19 chr21:46317800-46325400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
20 chr21:46318200-46325000 Strong transcription Primary B cells from peripheral blood blood
21 chr21:46318200-46327200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
22 chr21:46318400-46325000 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr21:46318400-46325000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr21:46318600-46324600 Strong transcription Primary T helper cells PMA-I stimulated --
25 chr21:46318800-46322800 Strong transcription Rectal Mucosa Donor 29 rectum
26 chr21:46319400-46322000 Strong transcription Primary monocytes fromperipheralblood blood
27 chr21:46319400-46325800 Weak transcription Fetal Intestine Small intestine
28 chr21:46319600-46326800 Genic enhancers Spleen Spleen
29 chr21:46320000-46323400 Strong transcription Primary B cells from cord blood blood
30 chr21:46320000-46326200 Weak transcription Fetal Muscle Leg muscle
31 chr21:46320000-46331000 Weak transcription Brain Substantia Nigra brain
32 chr21:46320200-46322000 Weak transcription HSMMtube muscle
33 chr21:46320200-46322200 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
34 chr21:46320400-46322000 Weak transcription Brain Anterior Caudate brain
35 chr21:46320600-46322000 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr21:46320600-46322400 Weak transcription Colonic Mucosa Colon
37 chr21:46320800-46322000 Strong transcription GM12878-XiMat blood
38 chr21:46320800-46322200 Strong transcription Adipose Nuclei Adipose
39 chr21:46320800-46322400 Genic enhancers Gastric stomach
40 chr21:46321000-46322000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr21:46321000-46322000 Genic enhancers Placenta Placenta
42 chr21:46321000-46322200 Strong transcription Lung lung
43 chr21:46321000-46326400 Weak transcription Stomach Smooth Muscle stomach
44 chr21:46321400-46322000 Strong transcription Sigmoid Colon Sigmoid Colon
45 chr21:46321400-46322400 Genic enhancers Monocytes-CD14+_RO01746 blood
46 chr21:46321600-46322000 Genic enhancers Esophagus oesophagus
47 chr21:46321600-46322400 ZNF genes & repeats Duodenum Mucosa Duodenum
48 chr21:46321600-46322600 Strong transcription Primary T cells fromperipheralblood blood
49 chr21:46321600-46322600 Strong transcription Liver Liver
50 chr21:46321600-46322800 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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