| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv934070 |
chr13:52362588-53174923 |
Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
59 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1040931 |
chr13:52564792-53350914 |
Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
54 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv541773 |
chr13:52564792-53350914 |
Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
54 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv428288 |
chr13:52728370-53068132 |
Weak transcription Active TSS Enhancers Strong transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
35 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv819887 |
chr13:52772113-52926921 |
Enhancers Active TSS Flanking Active TSS Weak transcription
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv900083 |
chr13:52783120-52885838 |
Weak transcription Active TSS Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive region
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
esv2453475 |
chr13:52803686-52895029 |
Active TSS Weak transcription Enhancers Flanking Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv900084 |
chr13:52835231-53119704 |
Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv983630 |
chr13:52837032-52883476 |
Active TSS Enhancers Weak transcription
|
TF binding regionCpG island
|
2 gene(s)
|
inside rSNPs
|
diseases
|
