| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv548532 |
chr1:189758772-190371671 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv932040 |
chr1:190005334-190914580 |
Enhancers Active TSS Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv1013402 |
chr1:190197674-190332464 |
Enhancers ZNF genes & repeats Active TSS Weak transcription
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 4 |
nsv535246 |
chr1:190197674-190332464 |
Enhancers Weak transcription Active TSS ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
nsv1004868 |
chr1:190259314-190303769 |
Enhancers Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
n/a
|
| 6 |
nsv535247 |
chr1:190259314-190303769 |
Enhancers Active TSS Weak transcription
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
n/a
|
| 7 |
nsv1007121 |
chr1:190263588-190305514 |
Active TSS Weak transcription Enhancers
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
n/a
|
| 8 |
nsv430013 |
chr1:190288297-190351677 |
Enhancers Active TSS Strong transcription ZNF genes & repeats Weak transcription Flanking Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
n/a
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015