Variant report

Variant	rs548771874
Chromosome Location	chr11:16024512-16024513
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:16020621..16022625-chr11:16024207..16026994,2	K562	blood:
2	chr11:16022109..16024928-chr11:16030034..16031853,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832074	chr11:15927105-16100772	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
2	nsv1045933	chr11:16023805-16067955	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:16004800-16024600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr11:16011000-16033800	Weak transcription	Left Ventricle	heart
3	chr11:16021200-16025400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr11:16022600-16024800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr11:16022800-16024800	Enhancers	HepG2	liver
6	chr11:16022800-16025000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr11:16023000-16025000	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr11:16023200-16025000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr11:16023400-16035400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr11:16023600-16025200	Enhancers	Fetal Heart	heart
11	chr11:16023600-16025200	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr11:16023800-16024600	Weak transcription	Psoas Muscle	Psoas
13	chr11:16023800-16025000	Enhancers	Fetal Lung	lung
14	chr11:16023800-16027600	Weak transcription	K562	blood
15	chr11:16023800-16027800	Weak transcription	Duodenum Mucosa	Duodenum
16	chr11:16023800-16029200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr11:16023800-16033200	Weak transcription	Fetal Muscle Leg	muscle
18	chr11:16023800-16033800	Weak transcription	Small Intestine	intestine
19	chr11:16023800-16035000	Weak transcription	Brain Substantia Nigra	brain
20	chr11:16023800-16050400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr11:16024000-16024800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr11:16024000-16024800	Enhancers	Osteobl	bone
23	chr11:16024200-16024800	Enhancers	Brain Angular Gyrus	brain
24	chr11:16024200-16024800	Enhancers	Right Ventricle	heart
25	chr11:16024200-16025200	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr11:16024200-16026600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr11:16024200-16029600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr11:16024400-16025200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr11:16024400-16028000	Weak transcription	Fetal Intestine Large	intestine
30	chr11:16024400-16033000	Weak transcription	Fetal Intestine Small	intestine
31	chr11:16024400-16067200	Weak transcription	Liver	Liver

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