The 2.0 version of rSNPBase

Variant report

Variant rs548941056
Chromosome Location chr16:69977668-69977669
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:69970800-69978800 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr16:69974600-69978000 Weak transcription NH-A brain
3 chr16:69974600-69986600 Weak transcription HepG2 liver
4 chr16:69975000-69985200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr16:69975200-69978200 Weak transcription Placenta Amnion Placenta Amnion
6 chr16:69975400-69978200 Weak transcription Stomach Smooth Muscle stomach
7 chr16:69975400-69978400 Weak transcription Small Intestine intestine
8 chr16:69975600-69977800 Weak transcription Brain Angular Gyrus brain
9 chr16:69975600-69977800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr16:69975600-69978600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr16:69975600-69985200 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr16:69975800-69978200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr16:69976000-69977800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr16:69976000-69978200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr16:69976000-69979400 Weak transcription Lung lung
16 chr16:69976000-69982200 Weak transcription Brain Hippocampus Middle brain
17 chr16:69976200-69977800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr16:69976200-69978000 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr16:69976200-69978000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr16:69976200-69978600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr16:69976200-69979200 Weak transcription Gastric stomach
22 chr16:69976200-69984200 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr16:69976400-69978000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr16:69976400-69978000 Weak transcription Esophagus oesophagus
25 chr16:69976400-69978000 Weak transcription Thymus Thymus
26 chr16:69976400-69978200 Enhancers Fetal Muscle Leg muscle
27 chr16:69976400-69978800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr16:69976600-69978200 Weak transcription Fetal Brain Female brain
29 chr16:69976800-69978200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr16:69976800-69978400 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr16:69976800-69978600 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr16:69976800-69979800 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr16:69976800-69998600 Weak transcription Spleen Spleen
34 chr16:69977000-69978800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr16:69977200-69978800 Weak transcription Primary B cells from peripheral blood blood
36 chr16:69977200-69979000 Weak transcription Primary neutrophils fromperipheralblood blood
37 chr16:69977200-69979000 Weak transcription Fetal Intestine Large intestine
38 chr16:69977200-69979000 Weak transcription Fetal Intestine Small intestine
39 chr16:69977400-69977800 Weak transcription Duodenum Mucosa Duodenum
40 chr16:69977400-69978000 Weak transcription Brain Substantia Nigra brain
41 chr16:69977400-69979000 Weak transcription Primary monocytes fromperipheralblood blood
42 chr16:69977400-69979000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr16:69977400-69979000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr16:69977400-69986200 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr16:69977400-69988800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr16:69977600-69979200 Weak transcription Primary T cells from cord blood blood
47 chr16:69977600-69985200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015