Variant report

Variant	rs548998404
Chromosome Location	chr12:103897268-103897269
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv528405	chr12:103896595-103901502	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103893600-103897400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr12:103894000-103898000	Weak transcription	GM12878-XiMat	blood
3	chr12:103895800-103898200	Enhancers	Thymus	Thymus
4	chr12:103897200-103897400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr12:103897200-103897800	Enhancers	Fetal Thymus	thymus
6	chr12:103897200-103898000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr12:103897200-103900000	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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