Variant report
| Variant | rs549058445 |
|---|---|
| Chromosome Location | chr2:181696854-181696855 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
(count:1 , 50 per page) page:
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| No. | lncRNA name | Chromosome Location | lncRNA alias |
|---|---|---|---|
| 1 | lnc-UBE2E3-4 | chr2:181696809-181696952 | ucscGeneNc_uc002uns_1 |
| No data |
| No data |
| No data |
Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv834475 | chr2:181537463-181724891 | Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 9 gene(s) | inside rSNPs | diseases |
| 2 | esv3460371 | chr2:181694965-181698445 | Enhancers | Chromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
| 3 | nsv821835 | chr2:181695124-181704766 | Active TSS Enhancers | lncRNA | n/a | inside rSNPs | diseases |
| 4 | esv3460373 | chr2:181695507-181698445 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| 5 | esv3460372 | chr2:181695507-181700205 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| 6 | esv3364161 | chr2:181696407-181699505 | Inactive region | lncRNA | n/a | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
