Variant report

Variant rs549070462
Chromosome Location chr3:99630438-99630439
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99600800-99638600 Weak transcription Left Ventricle heart
2 chr3:99604600-99648200 Weak transcription Primary T cells from cord blood blood
3 chr3:99616000-99631200 Weak transcription Primary B cells from cord blood blood
4 chr3:99619600-99644400 Weak transcription Right Ventricle heart
5 chr3:99620000-99638600 Weak transcription Small Intestine intestine
6 chr3:99621200-99638600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr3:99625000-99632800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr3:99625000-99639400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr3:99626800-99631200 Enhancers NHEK skin
10 chr3:99627200-99630600 Enhancers Stomach Mucosa stomach
11 chr3:99627200-99638600 Weak transcription K562 blood
12 chr3:99627800-99631200 Enhancers HMEC breast
13 chr3:99628000-99630600 Enhancers ES-I3 Cell Line embryonic stem cell
14 chr3:99628000-99631200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr3:99628200-99630600 Enhancers Osteobl bone
16 chr3:99628400-99630600 Enhancers NH-A brain
17 chr3:99628400-99630800 Enhancers HUES48 Cell Line embryonic stem cell
18 chr3:99628400-99630800 Enhancers iPS-15b Cell Line embryonic stem cell
19 chr3:99628400-99631400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:99628600-99630600 Enhancers HUES6 Cell Line embryonic stem cell
21 chr3:99628600-99630600 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr3:99628600-99630800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr3:99628600-99631400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr3:99629000-99639400 Weak transcription HSMM muscle
25 chr3:99629200-99630600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr3:99629200-99630600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr3:99629400-99630800 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr3:99629400-99631200 Enhancers Skeletal Muscle Female skeletal muscle
29 chr3:99629600-99630600 Enhancers Skeletal Muscle Male skeletal muscle
30 chr3:99629600-99630800 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr3:99629800-99630600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr3:99629800-99630600 Enhancers Fetal Adrenal Gland Adrenal Gland
33 chr3:99629800-99630600 Enhancers Fetal Muscle Leg muscle
34 chr3:99629800-99630800 Enhancers A549 lung
35 chr3:99630000-99634400 Weak transcription HepG2 liver
36 chr3:99630000-99637600 Weak transcription Muscle Satellite Cultured Cells --
37 chr3:99630000-99638200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:99630400-99630600 Enhancers ES-WA7 Cell Line embryonic stem cell
39 chr3:99630400-99630600 Enhancers Pancreas Pancrea
40 chr3:99630400-99630600 Enhancers Placenta Amnion Placenta Amnion
41 chr3:99630400-99630600 Enhancers Psoas Muscle Psoas
42 chr3:99630400-99630800 Enhancers Fetal Kidney kidney
43 chr3:99630400-99638400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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