Variant report

Variant	rs549097768
Chromosome Location	chr5:115755123-115755124
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845769	chr5:115730278-115763979	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
2	nsv4969	chr5:115753919-115767853	Weak transcription Enhancers Genic enhancers Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:115723000-115776000	Weak transcription	Primary hematopoietic stem cells	blood
2	chr5:115723600-115784800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
3	chr5:115730400-115769600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr5:115731000-115757000	Weak transcription	Gastric	stomach
5	chr5:115732600-115760200	Weak transcription	Liver	Liver
6	chr5:115734200-115755200	Weak transcription	Primary T helper cells PMA-I stimulated	--
7	chr5:115746800-115756600	Strong transcription	Primary T cells from cord blood	blood
8	chr5:115747200-115760000	Weak transcription	Right Ventricle	heart
9	chr5:115747400-115760800	Weak transcription	Left Ventricle	heart
10	chr5:115747400-115760800	Weak transcription	Pancreas	Pancrea
11	chr5:115747600-115756000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr5:115747800-115757600	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr5:115747800-115764200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr5:115747800-115765600	Weak transcription	Lung	lung
15	chr5:115748400-115756000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr5:115748600-115783000	Weak transcription	Thymus	Thymus
17	chr5:115749400-115782000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
18	chr5:115750200-115779400	Weak transcription	Fetal Intestine Small	intestine
19	chr5:115751200-115758800	Strong transcription	Primary B cells from cord blood	blood
20	chr5:115751600-115756400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr5:115751600-115757800	Weak transcription	Stomach Smooth Muscle	stomach
22	chr5:115751600-115774800	Weak transcription	Fetal Muscle Trunk	muscle
23	chr5:115752000-115757000	Weak transcription	Spleen	Spleen
24	chr5:115752400-115756800	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr5:115752800-115779400	Weak transcription	Fetal Intestine Large	intestine
26	chr5:115754000-115758400	Weak transcription	Psoas Muscle	Psoas
27	chr5:115754000-115759600	Weak transcription	Primary B cells from peripheral blood	blood
28	chr5:115754600-115755800	Enhancers	Brain Inferior Temporal Lobe	brain
29	chr5:115754800-115755200	Enhancers	Brain Anterior Caudate	brain
30	chr5:115754800-115755400	Enhancers	Fetal Heart	heart
31	chr5:115755000-115755200	Enhancers	Right Atrium	heart
32	chr5:115755000-115757200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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