| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1030437 |
chr5:179235423-179649944 |
Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
189 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv537982 |
chr5:179235423-179649944 |
Active TSS Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
189 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv948909 |
chr5:179249099-179772640 |
Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
175 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1033706 |
chr5:179402769-179806356 |
Strong transcription Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site
|
165 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
esv2758032 |
chr5:179534477-179729944 |
Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
esv2759398 |
chr5:179534477-179729944 |
Weak transcription Strong transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
16 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv830562 |
chr5:179555313-179622441 |
Genic enhancers Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv883289 |
chr5:179597647-179639885 |
Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
esv2763868 |
chr5:179618177-179632676 |
Weak transcription Enhancers Active TSS Bivalent Enhancer
|
Chromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
