Variant report

Variant	rs549231860
Chromosome Location	chr20:22452232-22452233
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3428094	chr20:22450900-22453266	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:22450400-22452400	Enhancers	Liver	Liver
2	chr20:22450800-22452400	Flanking Active TSS	A549	lung
3	chr20:22451200-22452800	Enhancers	Stomach Mucosa	stomach
4	chr20:22451600-22452600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr20:22451600-22452800	Enhancers	Gastric	stomach
6	chr20:22452000-22452400	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr20:22452000-22452400	Enhancers	HepG2	liver
8	chr20:22452000-22452800	Enhancers	Pancreas	Pancrea
9	chr20:22452200-22452800	Enhancers	K562	blood
10	chr20:22452200-22453200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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