Variant report
| Variant | rs549356461 |
|---|---|
| Chromosome Location | chr12:12474020-12474021 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12466000-12484600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 2 | chr12:12467000-12484400 | Weak transcription | Small Intestine | intestine |
| 3 | chr12:12470600-12480800 | Weak transcription | K562 | blood |
| 4 | chr12:12472200-12474200 | Enhancers | Fetal Intestine Large | intestine |
| 5 | chr12:12472200-12474200 | Enhancers | Fetal Intestine Small | intestine |
| 6 | chr12:12472800-12474200 | Flanking Active TSS | HepG2 | liver |
| 7 | chr12:12472800-12476800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 8 | chr12:12472800-12480400 | Weak transcription | Brain Angular Gyrus | brain |
| 9 | chr12:12473000-12482800 | Weak transcription | Gastric | stomach |
| 10 | chr12:12473000-12483000 | Weak transcription | Brain Hippocampus Middle | brain |
| 11 | chr12:12473200-12485200 | Weak transcription | HSMMtube | muscle |
| 12 | chr12:12473200-12501600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 13 | chr12:12473400-12474400 | Enhancers | Liver | Liver |
| 14 | chr12:12473400-12475400 | Weak transcription | Hela-S3 | cervix |
| 15 | chr12:12473400-12475800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 16 | chr12:12473400-12483000 | Weak transcription | Aorta | Aorta |
| 17 | chr12:12473400-12484200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 18 | chr12:12473600-12474200 | Enhancers | Fetal Muscle Trunk | muscle |
| 19 | chr12:12473600-12474400 | Enhancers | Fetal Stomach | stomach |
| 20 | chr12:12473600-12476200 | Weak transcription | Osteobl | bone |
| 21 | chr12:12473600-12482600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 22 | chr12:12473600-12485200 | Weak transcription | NH-A | brain |
| 23 | chr12:12473600-12493200 | Weak transcription | Fetal Brain Female | brain |
| 24 | chr12:12473600-12502000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 25 | chr12:12473800-12474200 | Enhancers | Fetal Lung | lung |
| 26 | chr12:12473800-12475600 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 27 | chr12:12473800-12475800 | Weak transcription | HSMM | muscle |
| 28 | chr12:12473800-12476200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 29 | chr12:12473800-12476400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr12:12473800-12476400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 31 | chr12:12473800-12476600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 32 | chr12:12473800-12483000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 33 | chr12:12473800-12483000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 34 | chr12:12473800-12484600 | Weak transcription | Lung | lung |
| 35 | chr12:12473800-12486200 | Weak transcription | Colonic Mucosa | Colon |
| 36 | chr12:12473800-12487600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 37 | chr12:12473800-12491800 | Weak transcription | Left Ventricle | heart |
| 38 | chr12:12473800-12502400 | Weak transcription | NHLF | lung |
| 39 | chr12:12474000-12474200 | Enhancers | Brain Substantia Nigra | brain |
| 40 | chr12:12474000-12476200 | Weak transcription | Fetal Kidney | kidney |
| 41 | chr12:12474000-12476600 | Weak transcription | A549 | lung |
| 42 | chr12:12474000-12476800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr12:12474000-12482800 | Weak transcription | Ovary | ovary |
| 44 | chr12:12474000-12484400 | Weak transcription | Pancreas | Pancrea |
| 45 | chr12:12474000-12489200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
