Variant report

Variant	rs549375167
Chromosome Location	chr10:18503697-18503698
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:18392878..18393854-chr10:18503287..18504544,6	MCF-7	breast:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3469840	chr10:18501971-18504819	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv3346215	chr10:18502321-18504569	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv3468729	chr10:18502796-18504044	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3495772	chr10:18502969-18503700	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv4994	chr10:18503046-18503751	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv17952	chr10:18503647-18504164	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:18493800-18503800	Weak transcription	Fetal Brain Male	brain
3	chr10:18499200-18511000	Weak transcription	Aorta	Aorta
4	chr10:18500000-18504800	Enhancers	Rectal Smooth Muscle	rectum
5	chr10:18500200-18506000	Weak transcription	Right Atrium	heart
6	chr10:18502000-18504400	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr10:18502400-18503800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr10:18502400-18513600	Weak transcription	Right Ventricle	heart
9	chr10:18502800-18505400	Weak transcription	Pancreatic Islets	Pancreatic Islet
10	chr10:18503400-18504800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr10:18503400-18505800	Enhancers	Fetal Heart	heart
12	chr10:18503600-18503800	Enhancers	Left Ventricle	heart
13	chr10:18503600-18503800	Enhancers	Pancreas	Pancrea
14	chr10:18503600-18504000	Flanking Active TSS	Colon Smooth Muscle	Colon
15	chr10:18503600-18504400	Enhancers	Brain Angular Gyrus	brain
16	chr10:18503600-18504400	Enhancers	Brain Anterior Caudate	brain
17	chr10:18503600-18504400	Enhancers	Brain Hippocampus Middle	brain
18	chr10:18503600-18504400	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
19	chr10:18503600-18504400	Enhancers	Rectal Mucosa Donor 29	rectum
20	chr10:18503600-18504400	Flanking Active TSS	Stomach Smooth Muscle	stomach
21	chr10:18503600-18504600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr10:18503600-18505000	Enhancers	Ovary	ovary
23	chr10:18503600-18505400	Enhancers	Fetal Stomach	stomach

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