The 2.0 version of rSNPBase

Variant report

Variant rs549426709
Chromosome Location chr13:96457421-96457422
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96443800-96465600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr13:96443800-96466000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr13:96444400-96461600 Weak transcription Esophagus oesophagus
4 chr13:96444400-96461800 Weak transcription Ovary ovary
5 chr13:96444400-96477600 Weak transcription Brain Angular Gyrus brain
6 chr13:96444400-96477600 Weak transcription NHLF lung
7 chr13:96444400-96485600 Weak transcription NHDF-Ad bronchial
8 chr13:96445000-96458400 Weak transcription Stomach Smooth Muscle stomach
9 chr13:96445600-96461600 Weak transcription Rectal Smooth Muscle rectum
10 chr13:96445600-96461800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr13:96445600-96461800 Weak transcription Pancreas Pancrea
12 chr13:96445600-96477400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr13:96445800-96461600 Weak transcription Aorta Aorta
14 chr13:96445800-96490000 Weak transcription HepG2 liver
15 chr13:96446200-96461600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr13:96446200-96461800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr13:96446200-96477400 Weak transcription Gastric stomach
18 chr13:96446400-96464800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr13:96446400-96466000 Weak transcription NHEK skin
20 chr13:96446800-96477400 Weak transcription Muscle Satellite Cultured Cells --
21 chr13:96446800-96477400 Weak transcription HSMMtube muscle
22 chr13:96447000-96461600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr13:96447200-96477400 Weak transcription Osteobl bone
24 chr13:96448800-96458400 Weak transcription Liver Liver
25 chr13:96449000-96462400 Weak transcription Hela-S3 cervix
26 chr13:96449000-96464800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr13:96449800-96458400 Weak transcription NH-A brain
28 chr13:96450200-96461600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr13:96451800-96458400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr13:96452000-96458400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr13:96452000-96490600 Weak transcription Fetal Kidney kidney
32 chr13:96452800-96466000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr13:96453000-96461800 Weak transcription Fetal Stomach stomach
34 chr13:96455000-96467800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr13:96456000-96461600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr13:96457000-96458400 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr13:96457400-96457800 Strong transcription HSMM muscle
38 chr13:96457400-96460000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015