Variant report

Variant	rs549427173
Chromosome Location	chr4:86831029-86831030
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830000	chr4:86745341-86909059	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv879519	chr4:86786204-86871282	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv2753470	chr4:86804078-86844350	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
4	nsv879520	chr4:86829529-86918232	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86790800-86835400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr4:86791200-86844400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr4:86808200-86846000	Weak transcription	HUVEC	blood vessel
4	chr4:86812200-86831200	Weak transcription	Primary B cells from peripheral blood	blood
5	chr4:86815800-86842800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr4:86818400-86831200	Weak transcription	Right Ventricle	heart
7	chr4:86823800-86832400	Weak transcription	NHDF-Ad	bronchial
8	chr4:86826800-86845400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr4:86827400-86834200	Weak transcription	Stomach Mucosa	stomach
10	chr4:86827600-86835400	Weak transcription	Small Intestine	intestine
11	chr4:86827600-86850600	Weak transcription	Spleen	Spleen
12	chr4:86828200-86831200	Weak transcription	Ovary	ovary
13	chr4:86828800-86834000	Weak transcription	Fetal Intestine Large	intestine
14	chr4:86828800-86834200	Weak transcription	Fetal Intestine Small	intestine
15	chr4:86829600-86843800	Weak transcription	Primary B cells from cord blood	blood
16	chr4:86830600-86831600	Enhancers	Adipose Nuclei	Adipose
17	chr4:86830800-86834400	Weak transcription	Fetal Kidney	kidney
18	chr4:86831000-86831200	Enhancers	Aorta	Aorta
19	chr4:86831000-86831200	Active TSS	Skeletal Muscle Male	skeletal muscle
20	chr4:86831000-86831400	Enhancers	Left Ventricle	heart
21	chr4:86831000-86831400	Enhancers	Lung	lung
22	chr4:86831000-86831400	Enhancers	Right Atrium	heart
23	chr4:86831000-86831400	Enhancers	HMEC	breast
24	chr4:86831000-86831600	Active TSS	Duodenum Mucosa	Duodenum
25	chr4:86831000-86831600	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr4:86831000-86831800	Enhancers	Brain Anterior Caudate	brain
27	chr4:86831000-86832000	Genic enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr4:86831000-86832200	Enhancers	Fetal Muscle Leg	muscle
29	chr4:86831000-86832400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
30	chr4:86831000-86832400	Enhancers	Breast Myoepithelial Primary Cells	Breast
31	chr4:86831000-86832400	Enhancers	Fetal Muscle Trunk	muscle
32	chr4:86831000-86832400	Enhancers	Pancreas	Pancrea
33	chr4:86831000-86832600	Enhancers	Gastric	stomach

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