Variant report

Variant	rs549429663
Chromosome Location	chr11:6117804-6117805
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:27 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv553241	chr11:5506034-6203685	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases
2	nsv530216	chr11:5614439-6468232	Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	nsv1036389	chr11:5695451-6177680	Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
4	nsv540943	chr11:5695451-6177680	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	55 gene(s)	inside rSNPs	diseases
5	esv10302	chr11:6104402-6121639	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv9953	chr11:6114243-6122520	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
7	esv16086	chr11:6115560-6119632	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
8	nsv553354	chr11:6116038-6118383	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
9	nsv553355	chr11:6116038-6120686	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
10	nsv553356	chr11:6116038-6121077	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
11	nsv553357	chr11:6116038-6121432	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
12	nsv553358	chr11:6116038-6121550	Bivalent Enhancer Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
13	nsv553359	chr11:6116105-6120686	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
14	nsv553360	chr11:6116294-6120686	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
15	nsv553361	chr11:6116294-6121077	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
16	nsv553362	chr11:6116776-6121006	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
17	nsv553363	chr11:6116776-6121432	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
18	nsv553364	chr11:6116776-6121496	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv1823542	chr11:6116776-6121550	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
20	nsv553365	chr11:6116776-6121550	Enhancers Bivalent Enhancer Weak transcription	n/a	n/a	inside rSNPs	n/a
21	nsv553366	chr11:6116776-6125660	Enhancers Bivalent Enhancer Weak transcription	TF binding region	1 gene(s)	inside rSNPs	n/a
22	nsv553367	chr11:6116974-6121077	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
23	nsv553368	chr11:6116974-6121432	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
24	nsv553369	chr11:6116974-6121550	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
25	esv1796383	chr11:6117526-6121550	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a
26	esv1800766	chr11:6117526-6121550	Bivalent Enhancer Enhancers	n/a	n/a	inside rSNPs	n/a
27	esv1830284	chr11:6117526-6121550	Enhancers Bivalent Enhancer	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:6116600-6118800	Enhancers	Placenta	Placenta
2	chr11:6117200-6118400	Enhancers	Fetal Heart	heart
3	chr11:6117400-6118800	Enhancers	Left Ventricle	heart
4	chr11:6117600-6118000	Enhancers	Right Ventricle	heart
5	chr11:6117600-6118600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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