Variant report

Variant	rs549434019
Chromosome Location	chr5:119807806-119807807
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532200	chr5:119317901-120102513	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv830463	chr5:119806643-119968825	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:119801800-119809200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr5:119802400-119809600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr5:119802600-119808000	Weak transcription	HSMMtube	muscle
4	chr5:119802600-119808000	Weak transcription	NH-A	brain
5	chr5:119802800-119809600	Weak transcription	Aorta	Aorta
6	chr5:119803000-119811800	Weak transcription	Fetal Heart	heart
7	chr5:119803800-119809200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr5:119804400-119812000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr5:119804800-119808000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr5:119806600-119809400	Enhancers	Muscle Satellite Cultured Cells	--
11	chr5:119806800-119808400	Enhancers	Osteobl	bone
12	chr5:119807000-119809000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr5:119807400-119808000	Enhancers	NHLF	lung
14	chr5:119807400-119810000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr5:119807600-119808000	Genic enhancers	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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