| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1061316 |
chr16:48264175-48594219 |
Weak transcription Strong transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
38 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
esv1800739 |
chr16:48418505-48560315 |
Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
34 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv428658 |
chr16:48438656-48587750 |
Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Active TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
12 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
esv1836131 |
chr16:48504364-48510755 |
Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
esv1836297 |
chr16:48504364-48510755 |
Enhancers Weak transcription
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 6 |
nsv572556 |
chr16:48504364-48510755 |
Weak transcription Enhancers
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 7 |
esv1833696 |
chr16:48504364-48512981 |
Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
n/a
|
| 8 |
nsv511575 |
chr16:48504364-48512981 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
inside rSNPs
|
n/a
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015